RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CA14Q9ULX7 337 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PLAGL1Q9UM63 463 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 EDARQ9UNE0 448 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 EXO1Q9UQ84 846 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 LIPT1Q9Y234 373 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM5Q9Y2B1 443 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 LSM2Q9Y333 95 aaKnown RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 V9GYH0 126 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SPACA6W5XKT8 324 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 PTPN13Q12923 2485 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 NUP210Q8TEM1 1887 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 TENM4Q6N022 2769 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SPTA1P02549 2419 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TRDV1A0A1B0GX56 115 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 DUXAA6NLW8 204 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CPSF4LA6NMK7 179 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 A8MV72 311 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 KDM4EB2RXH2 506 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 SGK494L7N484 410 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RTCAO00442 366 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 HMGN4O00479 90 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 LYRM1O43325 122 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 STX11O75558 287 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 OR5F1O95221 314 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 DHFRP00374 187 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RHOP08100 348 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ERGP11308 486 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 C4BPBP20851 252 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 GALP22466 123 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CPN2P22792 545 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 F8A1P23610 371 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 MMP11P24347 488 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 FPR3P25089 353 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 HLA-DMAP28067 261 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 PRKAR1BP31321 381 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 FGF9P31371 208 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ACSL1P33121 698 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 MPIP34949 423 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RCVRNP35243 200 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ETV5P41161 510 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 FRKP42685 505 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 SLC1A3P43003 542 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CRYBB2P43320 205 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TSFMP43897 325 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 GPR3P46089 330 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ETV1P50549 477 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RAB28P51157 221 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 LIMK1P53667 647 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ARPC4P59998 168 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RPS7P62081 194 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RPS25P62851 125 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ACTC1P68032 377 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ACTA1P68133 377 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 HSD11B2P80365 405 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ABATP80404 500 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 PITPNAQ00169 270 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CDK5Q00535 292 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 BDH1Q02338 343 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CSTF1Q05048 431 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RGS1Q08116 209 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 PIN1Q13526 163 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TPBGQ13641 420 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 LASP1Q14847 261 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 SEC23BQ15437 767 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF79Q15937 498 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 SYPL1Q16563 259 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM52BQ4KMG9 183 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ENTPD8Q5MY95 495 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 C9orf64Q5T6V5 341 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 OR4C11Q6IEV9 310 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 C1orf94Q6P1W5 598 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF529Q6P280 563 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CNIH2Q6PI25 160 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM107Q6UX40 140 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 BAIAP2L2Q6UXY1 529 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 RASSF6Q6ZTQ3 369 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF767PQ75MW2 155 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ERN2Q76MJ5 926 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 GET4Q7L5D6 327 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 HDDC2Q7Z4H3 204 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TSEN54Q7Z6J9 526 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 NRROSQ86YC3 692 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 GPALPP1Q8IXQ4 340 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TCTE3Q8IZS6 198 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 SLC7A5P1Q8MH63 180 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 Q8N402 240 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 C2orf73Q8N5S3 287 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CELF5Q8N6W0 485 aaKnown RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 LRRC17Q8N6Y2 441 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 Q8N9G6 341 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 Q8NA96 180 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF740Q8NDX6 193 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 TMIEQ8NEW7 156 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 OR2T33Q8NG76 320 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 OR5D16Q8NGK9 328 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 SLC7A13Q8TCU3 470 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 CREB3L4Q8TEY5 395 aa4.06□□□□□ -1.76
ATXN3-241ENST00000556374 JPH3Q8WXH2 748 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-241ENST00000556374 ACOT11Q8WXI4 607 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms