RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TFPIP10646 304 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 EPXP11678 715 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 POU2F1P14859 743 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ENPP1P22413 925 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 TACR3P29371 465 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 PRKAR1BP31321 381 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ACAA2P42765 397 aaKnown RBP10.28□□□□□ -0.76
SLIRP-205ENST00000556310 MTPNP58546 118 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 KLF10Q13118 480 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 SCARB2Q14108 478 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 DAZAP2Q15038 168 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-205ENST00000556310 MAPRE2Q15555 327 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ADRM1Q16186 407 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 TRMT5Q32P41 509 aaKnown RBP10.28□□□□□ -0.76
SLIRP-205ENST00000556310 COQ5Q5HYK3 327 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 TMEM201Q5SNT2 666 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ABLIM2Q6H8Q1 611 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 CLIP4Q8N3C7 705 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF610Q8N9Z0 462 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 HIPK4Q8NE63 616 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 LINC01560Q8TB33 94 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 C10orf82Q8WW14 230 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ZHX1-C8orf76Q96EF9 292 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 SPATA5L1Q9BVQ7 753 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 OR11A1Q9GZK7 315 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ADAM19Q9H013 955 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 BCO1Q9HAY6 547 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 SAR1AQ9NR31 198 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 PLSCR4Q9NRQ2 329 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ANGPT4Q9Y264 503 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 TMED7Q9Y3B3 224 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 TESMINQ9Y4I5 508 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 AKAP6Q13023 2319 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 IGHV3-15A0A0B4J1V0 119 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 TMEM72A0PK05 275 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 FBP2O00757 339 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 SLC22A2O15244 555 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 SLC6A2P23975 617 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 ADSLP30566 484 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-205ENST00000556310 UGT2B10P36537 528 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 KCNJ5P48544 419 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 COPZ1P61923 177 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 FAM27E3Q08E93 113 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 RBBP4Q09028 425 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 SF3A3Q12874 501 aaKnown RBP eCLIP10.27□□□□□ -0.77
SLIRP-205ENST00000556310 SELPLGQ14242 412 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 CYP51A1Q16850 503 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 WBP2NLQ6ICG8 309 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 DHRS4L2Q6PKH6 230 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 NET1Q7Z628 596 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-205ENST00000556310 SERPINA11Q86U17 422 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 CDH24Q86UP0 819 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 STK32CQ86UX6 486 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 PTOV1Q86YD1 416 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 TUSC5Q8IXB3 177 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 C11orf65Q8NCR3 313 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 DDIT4LQ96D03 193 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 ARL5BQ96KC2 179 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 ZNF607Q96SK3 696 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 PSD2Q9BQI7 771 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 GPATCH1Q9BRR8 931 aaKnown RBP10.27□□□□□ -0.77
SLIRP-205ENST00000556310 KAT8Q9H7Z6 458 aaKnown RBP10.27□□□□□ -0.77
SLIRP-205ENST00000556310 FANCFQ9NPI8 374 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 RASSF1Q9NS23 344 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 NDRG3Q9UGV2 375 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 ING1Q9UK53 422 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-205ENST00000556310 CAPN7Q9Y6W3 813 aa10.27□□□□□ -0.77
SLIRP-205ENST00000556310 PRORSD1PA6NEY8 169 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 C16orf97H3BN30 126 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 FXYD1O00168 92 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 MRASO14807 208 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 FRS3O43559 492 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 YES1P07947 543 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 PRG2P13727 222 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 KLK2P20151 261 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 CCNA2P20248 432 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 CXCR1P25024 350 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 AQP1P29972 269 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 PCBP3P57721 371 aaKnown RBP10.26□□□□□ -0.77
SLIRP-205ENST00000556310 RASGEF1BQ0VAM2 473 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 CAPRIN1Q14444 709 aaKnown RBP10.26□□□□□ -0.77
SLIRP-205ENST00000556310 EXOC3L2Q2M3D2 409 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 REP15Q6BDI9 236 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 TFAP2EQ6VUC0 442 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 BEND4Q6ZU67 534 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 NUFIP2Q7Z417 695 aaKnown RBP10.26□□□□□ -0.77
SLIRP-205ENST00000556310 MTDHQ86UE4 582 aaKnown RBP10.26□□□□□ -0.77
SLIRP-205ENST00000556310 SNX32Q86XE0 403 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 SLC30A8Q8IWU4 369 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 CADM2Q8N3J6 435 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 BHLHE22Q8NFJ8 381 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-205ENST00000556310 PIGXQ8TBF5 258 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 C3orf49Q96BT1 292 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 CLEC4MQ9H2X3 399 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-205ENST00000556310 C12orf49Q9H741 205 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 TMEM181Q9P2C4 612 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 TRAPPC4Q9Y296 219 aa10.26□□□□□ -0.77
SLIRP-205ENST00000556310 IGKV3D-15A0A087WSY6 115 aa10.25□□□□□ -0.77
SLIRP-205ENST00000556310 ZC3H12DA2A288 527 aaKnown RBP10.25□□□□□ -0.77
SLIRP-205ENST00000556310 ZNF724A8MTY0 619 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms