RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TFPIP10646 304 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 RYKP34925 604 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 FABP6P51161 128 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 EFNA4P52798 201 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 SAXO2Q658L1 398 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TNFAIP8L2Q6P589 184 aaPredicted RBP12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 ANKRD46Q86W74 232 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 PIGXQ8TBF5 258 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 PROX1Q92786 737 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 ROPN1LQ96C74 230 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TUBGCP3Q96CW5 907 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 BOD1Q96IK1 185 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 SORCS2Q96PQ0 1159 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 PRPF18Q99633 342 aaKnown RBP12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 PRR14Q9BWN1 585 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 C20orf27Q9GZN8 174 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 EML4Q9HC35 981 aaKnown RBP12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 LGALS13Q9UHV8 139 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 DCTN4Q9UJW0 460 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TRAPPC4Q9Y296 219 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 SLC35A3Q9Y2D2 325 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 WDR45Q9Y484 360 aa12.55□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TMEM72A0PK05 275 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 ATP6V1G2-DDX39BF2Z307 99 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TYROBPO43914 113 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 MRPL33O75394 65 aaKnown RBP12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 BPGMP07738 259 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 THBS2P35442 1172 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 SERPINB5P36952 375 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 CLK1P49759 484 aaKnown RBP12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 KCNJ10P78508 379 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 CASP8Q14790 479 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 MAPK11Q15759 364 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 CYB5R2Q6BCY4 276 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 OR7E24Q6IFN5 339 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 BHLHB9Q6PI77 547 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 KLHL17Q6TDP4 642 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 C16orf62Q7Z3J2 963 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 HOMEZQ8IX15 550 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 KIF18AQ8NI77 898 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 XAGE5Q8WWM1 108 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 OIT3Q8WWZ8 545 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 NEURL3Q96EH8 262 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 SOX7Q9BT81 388 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 SLC38A1Q9H2H9 487 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 AKTIPQ9H8T0 292 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 POLE3Q9NRF9 147 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TMEM181Q9P2C4 612 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 POU2F3Q9UKI9 436 aa12.54□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TLDC2A0PJX2 215 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 HMGN4O00479 90 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 LMX1BO60663 402 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 CHRM4P08173 479 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 CCNA2P20248 432 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 RPS4Y1P22090 263 aaKnown RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 USF1P22415 310 aaPredicted RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 UQCRC2P22695 453 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 IDH2P48735 452 aaKnown RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 P2RY4P51582 365 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 OR2B6P58173 313 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 SMU1Q2TAY7 513 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 CASP12Q6UXS9 341 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 IL17RELQ6ZVW7 336 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 LINGO2Q7L985 606 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 C1orf162Q8NEQ5 155 aaPredicted RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 OR4A15Q8NGL6 344 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 ARL8AQ96BM9 186 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 MSI2Q96DH6 328 aaKnown RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TEX37Q96LM6 180 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 ZNF385AQ96PM9 386 aaKnown RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 BEX2Q9BXY8 128 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 ADAM19Q9H013 955 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 NOP53Q9NZM5 478 aaKnown RBP12.53□□□□□ -0.4
CHMP4BP1-201ENST00000556017 TMED7-TICAM2A0A0A6YYA0 188 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 IGHV4-61A0A0C4DH41 118 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PRSS51A0A1B0GVH4 220 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NUDT17P0C025 328 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NR4A2P43354 598 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MAGEA8P43361 318 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 LGALS3BPQ08380 585 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 SYPL1Q16563 259 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 C17orf78Q8N4C9 275 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZNF781Q8N8C0 355 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ANKFN1Q8N957 763 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZNF563Q8TA94 476 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TMEM45BQ96B21 275 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TESCQ96BS2 214 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 ZHX1-C8orf76Q96EF9 292 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 PPP1R36Q96LQ0 422 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 C19orf24Q9BVV8 132 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 NELFAQ9H3P2 528 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 MOKQ9UQ07 419 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 AMDHD2Q9Y303 409 aa12.52□□□□□ -0.41
CHMP4BP1-201ENST00000556017 TMED7Q9Y3B3 224 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms