RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GNPDA2Q8TDQ7 276 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 STK35Q8TDR2 534 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 SLC25A43Q8WUT9 341 aaPredicted RBP9.98□□□□□ -0.81
TMEM260-208ENST00000555905 DNAJC9Q8WXX5 260 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 DDIT4LQ96D03 193 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 BPIFA2Q96DR5 249 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 SFXN2Q96NB2 322 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 BARD1Q99728 777 aaKnown RBP9.98□□□□□ -0.81
TMEM260-208ENST00000555905 SMURF2Q9HAU4 748 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 QPCTLQ9NXS2 382 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 USE1Q9NZ43 259 aa9.98□□□□□ -0.81
TMEM260-208ENST00000555905 MGAQ8IWI9 3026 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 IGKV1D-42A0A075B6H8 117 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 TRAV36DV7A0A075B6V5 113 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 TMEM72A0PK05 275 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 OR2M5A3KFT3 312 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 GJE1A6NN92 205 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 LINC01387J3KSC0 135 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 TFECO14948 347 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 PIP5K1CO60331 668 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 GASTP01350 101 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 ALPLP05186 524 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 TFPIP10646 304 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 IFI30P13284 250 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 ZNF24P17028 368 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 CDH2P19022 906 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 GSTM3P21266 225 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 CBLP22681 906 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 IGFBP5P24593 272 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 DAPP51397 102 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 CTBP2P56545 445 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 PPP2R2BQ00005 443 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 IL1RL1Q01638 556 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 ALDH6A1Q02252 535 aaKnown RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 CRYZQ08257 329 aaKnown RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 SLC10A1Q14973 349 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 INAQ16352 499 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 WIPI1Q5MNZ9 446 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 ZNF770Q6IQ21 691 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 C1orf94Q6P1W5 598 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 PGBD2Q6P3X8 592 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 FAHD1Q6P587 224 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 P3H2Q8IVL5 708 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 C10orf53Q8N6V4 93 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 ATP6V1C2Q8NEY4 427 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 PFN4Q8NHR9 129 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 GTPBP3Q969Y2 492 aaKnown RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 SGTBQ96EQ0 304 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 CRELD1Q96HD1 420 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 FAM46AQ96IP4 442 aaKnown RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 NPAS1Q99742 590 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 SLC29A1Q99808 456 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 DGCR6LQ9BY27 220 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 UCK2Q9BZX2 261 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 ZNF71Q9NQZ8 489 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 PAPOLBQ9NRJ5 636 aaKnown RBP9.97□□□□□ -0.81
TMEM260-208ENST00000555905 KRT84Q9NSB2 600 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 POFUT2Q9Y2G5 429 aa9.97□□□□□ -0.81
TMEM260-208ENST00000555905 MPDZO75970 2070 aa9.96□□□□□ -0.81
TMEM260-208ENST00000555905 ENO4A6NNW6 628 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 EFCAB9A8MZ26 197 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 H3BML4 177 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 WISP1O95388 367 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 AHSA1O95433 338 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 IGF2P01344 180 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 FREM3P0C091 2139 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 SAGP10523 405 aaPredicted RBP9.96□□□□□ -0.82
TMEM260-208ENST00000555905 SFTPCP11686 197 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 PEPDP12955 493 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 POU2F1P14859 743 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 ZNF26P17031 533 aaPredicted RBP9.96□□□□□ -0.82
TMEM260-208ENST00000555905 CHMP24386 653 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 FPR3P25089 353 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 GPR4P46093 362 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 OMPP47874 163 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 CLK1P49759 484 aaKnown RBP9.96□□□□□ -0.82
TMEM260-208ENST00000555905 RAD23AP54725 363 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 B3GALT5-AS1P59052 145 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 PMP22Q01453 160 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 COX10Q12887 443 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 RFX4Q33E94 735 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 PLEKHN1Q494U1 663 aaPredicted RBP9.96□□□□□ -0.82
TMEM260-208ENST00000555905 C1orf140Q5VVS0 124 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 SLC6A19Q695T7 634 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 KDM4DQ6B0I6 523 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 RPUSD3Q6P087 351 aaKnown RBP9.96□□□□□ -0.82
TMEM260-208ENST00000555905 C19orf48Q6RUI8 117 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 TMPRSS11FQ6ZWK6 438 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 ZER1Q7Z7L7 766 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 PNPLA2Q96AD5 504 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 RDH12Q96NR8 316 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 UBL7Q96S82 380 aaPredicted RBP9.96□□□□□ -0.82
TMEM260-208ENST00000555905 NIPSNAP1Q9BPW8 284 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 POTEKPQ9BYX7 375 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 OR11A1Q9GZK7 315 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 LDAHQ9H6V9 325 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 TMEM185BQ9H7F4 350 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 ACKR4Q9NPB9 350 aa9.96□□□□□ -0.82
TMEM260-208ENST00000555905 MEPEQ9NQ76 525 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms