RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MRPL49Q13405 166 aaKnown RBP11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CCNIQ14094 377 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 DGCR6Q14129 220 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 C3AR1Q16581 482 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 PDSS1Q5T2R2 415 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 RTL6Q6ICC9 239 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 POMZP3Q6PJE2 187 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 WDR88Q6ZMY6 472 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CD163Q86VB7 1156 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CYP4Z1Q86W10 505 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 NKAIN4Q8IVV8 208 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 OR5M9Q8NGP3 310 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 OR10D3Q8NH80 312 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 OR2V1Q8NHB1 315 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 RELTQ969Z4 430 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 SLCO4A1Q96BD0 722 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 ARL5BQ96KC2 179 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 HS6ST2Q96MM7 605 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 PIP5K1AQ99755 562 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 FNDC11Q9BVV2 318 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CHID1Q9BWS9 393 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 SLC19A3Q9BZV2 496 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 TP63Q9H3D4 680 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-219ENST00000555323 TMEM185BQ9H7F4 350 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 COQ10BQ9H8M1 238 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CALHM2Q9HA72 323 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 MAN2C1Q9NTJ4 1040 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CAMK2AQ9UQM7 478 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 ZGRF1Q86YA3 2104 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 hCG_2039718K7EN88 272 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 EIF1AYO14602 144 aaKnown RBP11.38□□□□□ -0.59
SYNE2-219ENST00000555323 TNFSF11O14788 317 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 DNPH1O43598 174 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 OR2T1O43869 369 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 KRT36O76013 467 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 PMS2P2O95744 297 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 OPN1LWP04000 364 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 CCNA2P20248 432 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 FUT4P22083 530 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 GNLYP22749 145 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 ACVR2AP27037 513 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 SLC7A1P30825 629 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 SFTPDP35247 375 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 AGFG1P52594 562 aaKnown RBP11.38□□□□□ -0.59
SYNE2-219ENST00000555323 SMIM11AP58511 58 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 H3F3AP84243 136 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 SRYQ05066 204 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 MYBPHQ13203 477 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 TRAM2Q15035 370 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 C1QL3Q5VWW1 255 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 NSUN5P2Q63ZY6 315 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 HBMQ6B0K9 141 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 ZNF585AQ6P3V2 769 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 TTC33Q6PID6 262 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-219ENST00000555323 UBQLNLQ8IYU4 475 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 RNF113BQ8IZP6 322 aaKnown RBP11.38□□□□□ -0.59
SYNE2-219ENST00000555323 ATP6V1C2Q8NEY4 427 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 MFSD8Q8NHS3 518 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 SMPDL3BQ92485 455 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 OSTF1Q92882 214 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 OR5B2Q96R09 309 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 TUBA1CQ9BQE3 449 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 FUZQ9BT04 418 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 PTDSS2Q9BVG9 487 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 OR11A1Q9GZK7 315 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 TIGARQ9NQ88 270 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 ARMC1Q9NVT9 282 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 AURKCQ9UQB9 309 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 OSGIN2Q9Y236 505 aa11.38□□□□□ -0.59
SYNE2-219ENST00000555323 A0A1W2PNR3 127 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 CLCA1A8K7I4 914 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 FTCDNL1E5RQL4 147 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 E9PLN8 166 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 H0Y3Z8 333 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 SULT2B1O00204 365 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 SEC14L5O43304 696 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 DIRAS1O95057 198 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 H1F0P07305 194 aaKnown RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 TFPIP10646 304 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 IMPDH2P12268 514 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 EIF1AXP47813 144 aaKnown RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 DIO1P49895 249 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 CASP6P55212 293 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 CSNK2A1P68400 391 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 GK3PQ14409 553 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 EIF2S3LQ2VIR3 472 aaKnown RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 ACSF3Q4G176 576 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 C1orf140Q5VVS0 124 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 CHMP1BQ7LBR1 199 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 C10orf67Q8IYJ2 551 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 TMEM239Q8WW34 195 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 ACOT11Q8WXI4 607 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 WNT2BQ93097 391 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 CPNE4Q96A23 557 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 KTI12Q96EK9 354 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 ZNF845Q96IR2 970 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-219ENST00000555323 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 EPYCQ99645 322 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
SYNE2-219ENST00000555323 DENND2DQ9H6A0 471 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms