RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FAM222BQ8WU58 562 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 RCN3Q96D15 328 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 OR11A1Q9GZK7 315 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 PIF1Q9H611 641 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 C12orf49Q9H741 205 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 EVA1AQ9H8M9 152 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 NANOGQ9H9S0 305 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 GP6Q9HCN6 339 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 ELOVL5Q9NYP7 299 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 CRIM1Q9NZV1 1036 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 EMC3Q9P0I2 261 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 KLHL13Q9P2N7 655 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 NDRG3Q9UGV2 375 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 AKAP6Q13023 2319 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 ELOA3DA6NLF2 546 aaPredicted RBP10.8□□□□□ -0.68
SRP54-206ENST00000555317 CYSRT1A8MQ03 144 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 DNPH1O43598 174 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 YES1P07947 543 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 COX4I1P13073 169 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 PRG2P13727 222 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 PCGF2P35227 344 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 IDUAP35475 653 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 CD79BP40259 229 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 ACAA2P42765 397 aaKnown RBP10.8□□□□□ -0.68
SRP54-206ENST00000555317 GYS2P54840 703 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 SLC35A1P78382 337 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 HOXC5Q00444 222 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 GUSBP1Q15486 140 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 ELOA3BQ3SY89 546 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 RABL3Q5HYI8 236 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 ERICH5Q6P6B1 374 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 NET1Q7Z628 596 aaPredicted RBP10.8□□□□□ -0.68
SRP54-206ENST00000555317 ARPINQ7Z6K5 226 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 PTOV1Q86YD1 416 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 TUSC5Q8IXB3 177 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 SMYD1Q8NB12 490 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 ELOA3Q8NG57 546 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 OR52E4Q8NGH9 312 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 PIGXQ8TBF5 258 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 RASSF5Q8WWW0 418 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 CMTM5Q96DZ9 223 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 DNAJA3Q96EY1 480 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 NAA11Q9BSU3 229 aaPredicted RBP10.8□□□□□ -0.68
SRP54-206ENST00000555317 TAPBPLQ9BX59 468 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 TRIM2Q9C040 744 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 ADAM19Q9H013 955 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 MCCC2Q9HCC0 563 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 TMEM181Q9P2C4 612 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 TESQ9UGI8 421 aaKnown RBP10.8□□□□□ -0.68
SRP54-206ENST00000555317 TRAPPC4Q9Y296 219 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 AP3M1Q9Y2T2 418 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 FBN2P35556 2912 aa10.8□□□□□ -0.68
SRP54-206ENST00000555317 A8MVM7 634 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 FXYD1O00168 92 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 AIM2O14862 343 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 CASKO14936 926 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 SMAD9O15198 467 aaKnown RBP10.79□□□□□ -0.68
SRP54-206ENST00000555317 EIF1BO60739 113 aaKnown RBP10.79□□□□□ -0.68
SRP54-206ENST00000555317 CYTIPO60759 359 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 IFNA14P01570 189 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 GPIP06744 558 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 DRD4P21917 467 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 GTF2E2P29084 291 aaKnown RBP10.79□□□□□ -0.68
SRP54-206ENST00000555317 VMACQ2NL98 169 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 BEND4Q6ZU67 534 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 ZNF295-AS1Q8N0V1 137 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 ZNF610Q8N9Z0 462 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 DNAJA4Q8WW22 397 aaPredicted RBP10.79□□□□□ -0.68
SRP54-206ENST00000555317 C3orf49Q96BT1 292 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 ARL5BQ96KC2 179 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 MED18Q9BUE0 208 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 KLHL4Q9C0H6 718 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 EFCAB1Q9HAE3 211 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 TMEM27Q9HBJ8 222 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 PLSCR4Q9NRQ2 329 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 FREM1Q5H8C1 2179 aa10.79□□□□□ -0.68
SRP54-206ENST00000555317 SH3D21A4FU49 640 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 C16orf97H3BN30 126 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 M0QX08 132 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 GPR171O14626 319 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 SNX3O60493 162 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 MFN2O95140 757 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 AHSA1O95433 338 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 CGAP01215 116 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 OPN1SWP03999 348 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 PNMTP11086 282 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 EPXP11678 715 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 UGT2B10P36537 528 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 NUDT2P50583 147 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 PCBP3P57721 371 aaKnown RBP10.78□□□□□ -0.68
SRP54-206ENST00000555317 DMTNQ08495 405 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 FAM27E3Q08E93 113 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 BNIP2Q12982 314 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 ALG10BQ5I7T1 473 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 ZNF474Q6S9Z5 364 aaPredicted RBP10.78□□□□□ -0.68
SRP54-206ENST00000555317 GALNT5Q7Z7M9 940 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 ZNF100Q8IYN0 542 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 OR2T12Q8NG77 320 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 PROX1Q92786 737 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms