RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CCNYL3P0C7X3 344 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 LIMS3P0CW19 117 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 LIMS4P0CW20 117 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 OR12D1P0DN82 309 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 PSMB5P28074 263 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 PEBP1P30086 187 aaKnown RBP10.23□□□□□ -0.77
SRP54-205ENST00000554803 MAN2A2P49641 1150 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 GZMKP49863 264 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 NCBP2P52298 156 aaKnown RBP eCLIP10.23□□□□□ -0.77
SRP54-205ENST00000554803 EPHA4P54764 986 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 RAG2P55895 527 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 STXBP1P61764 594 aaKnown RBP10.23□□□□□ -0.77
SRP54-205ENST00000554803 MAB21L1Q13394 359 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 IKZF1Q13422 519 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 KIR2DS5Q14953 304 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 PRSS53Q2L4Q9 553 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 RPS26P11Q5JNZ5 115 aaPredicted RBP10.23□□□□□ -0.77
SRP54-205ENST00000554803 NDUFAF5Q5TEU4 345 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 AADACL4Q5VUY2 407 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 C22orf42Q6IC83 251 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 ZNF782Q6ZMW2 699 aaPredicted RBP10.23□□□□□ -0.77
SRP54-205ENST00000554803 MBOAT2Q6ZWT7 520 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 TRIM48Q8IWZ4 208 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 CLIP4Q8N3C7 705 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 Q8N402 240 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 ARIH2OSQ8N7S6 290 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 ANKRD53Q8N9V6 530 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 ZNF740Q8NDX6 193 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 OR2T33Q8NG76 320 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 OR2L5Q8NG80 312 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 BRIX1Q8TDN6 353 aaKnown RBP10.23□□□□□ -0.77
SRP54-205ENST00000554803 XAGE5Q8WWM1 108 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 RNF170Q96K19 258 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 LURAP1Q96LR2 239 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 HYLS1Q96M11 299 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 CMTM3Q96MX0 182 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 TMEM246Q9BRR3 403 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 TTYH2Q9BSA4 534 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 DPH7Q9BTV6 452 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 TWSG1Q9GZX9 223 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 GLIPR2Q9H4G4 154 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 MARCH7Q9H992 704 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 C14orf105Q9NVL8 296 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 COLEC10Q9Y6Z7 277 aa10.23□□□□□ -0.77
SRP54-205ENST00000554803 A0A087WUU8 490 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 ARPC4-TTLL3A0A0A6YYG9 625 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 FAM240BA0A1B0GVZ2 78 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 M0R129 80 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 LYRM1O43325 122 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 KLF4O43474 513 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 OR1F1O43749 312 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 RGS9O75916 674 aaPredicted RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 ADRA2AP08913 450 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 HK1P19367 917 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 PAICSP22234 425 aaKnown RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 HIST1H1TP22492 207 aaPredicted RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 ALAS2P22557 587 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 NDUFS1P28331 727 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 CSNK1G2P78368 415 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 MEF2AQ02078 507 aaPredicted RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 HHEXQ03014 270 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 POU4F2Q12837 409 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 FAPQ12884 760 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 MRPL28Q13084 256 aaKnown RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 PIN1Q13526 163 aaPredicted RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 EFR3AQ14156 821 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 TESK1Q15569 626 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 SYPL1Q16563 259 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 PGGHGQ32M88 737 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 HBMQ6B0K9 141 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 ACSM5Q6NUN0 579 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 SLC48A1Q6P1K1 146 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 HDDC2Q7Z4H3 204 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 ADCK2Q7Z695 626 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 FAM20CQ8IXL6 584 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 FAM109AQ8N4B1 249 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 OR4E2Q8NGC2 313 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 OR6T1Q8NGN1 323 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 NEIL3Q8TAT5 605 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 LCN9Q8WX39 176 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 PHYHIPQ92561 330 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 RAB8BQ92930 207 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 MRPL48Q96GC5 212 aaKnown RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 ACTRT3Q9BYD9 372 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 SERHL2Q9H4I8 314 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 MTHFD2LQ9H903 347 aaPredicted RBP10.22□□□□□ -0.77
SRP54-205ENST00000554803 LHX9Q9NQ69 397 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 TRIM36Q9NQ86 728 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 TIGARQ9NQ88 270 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 POLE3Q9NRF9 147 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 POT1Q9NUX5 634 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 ACOXLQ9NUZ1 547 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 SPHK1Q9NYA1 384 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 STMN3Q9NZ72 180 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 LUZP4Q9P127 313 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 ZNF780BQ9Y6R6 833 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 MAU2Q9Y6X3 613 aa10.22□□□□□ -0.77
SRP54-205ENST00000554803 MAP1AP78559 2803 aaPredicted RBP10.21□□□□□ -0.77
SRP54-205ENST00000554803 ZNF469Q96JG9 3925 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms