RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GLRX2Q9NS18 164 aa7.49□□□□□ -1.21
PSEN1-209ENST00000553855 ACER3Q9NUN7 267 aa7.49□□□□□ -1.21
PSEN1-209ENST00000553855 SLC25A37Q9NYZ2 338 aa7.49□□□□□ -1.21
PSEN1-209ENST00000553855 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
PSEN1-209ENST00000553855 KCNE5Q9UJ90 142 aa7.49□□□□□ -1.21
PSEN1-209ENST00000553855 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
PSEN1-209ENST00000553855 EXPH5Q8NEV8 1989 aa7.49□□□□□ -1.21
PSEN1-209ENST00000553855 LRRK2Q5S007 2527 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 EML6Q6ZMW3 1958 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 NDUFAB1O14561 156 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ADAMDEC1O15204 470 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 TOXO94900 526 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 IFNA14P01570 189 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 CPEP16870 476 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 GPX2P18283 190 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 PRKAR1BP31321 381 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 LSP1P33241 339 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SLC1A3P43003 542 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 KCNJ5P48544 419 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 CLK1P49759 484 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 POLR2HP52434 150 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 MAP2K6P52564 334 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 AGFG1P52594 562 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF136P52737 540 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SUCLG1P53597 346 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 MTPNP58546 118 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SIRPAP78324 504 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 MYBPHQ13203 477 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 RNPS1Q15287 305 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 TOMM34Q15785 309 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 RNF220Q5VTB9 566 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 REP15Q6BDI9 236 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 CGB2Q6NT52 195 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 DLEU7Q6UYE1 221 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 PLEKHM3Q6ZWE6 761 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 GDF7Q7Z4P5 450 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ARPINQ7Z6K5 226 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ADGRE4PQ86SQ3 457 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 PATL1Q86TB9 770 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 GGNQ86UU5 652 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 STK32CQ86UX6 486 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 VRK2Q86Y07 508 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ARMC8Q8IUR7 673 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 GCNT2Q8N0V5 402 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SLC43A2Q8N370 569 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 RP9Q8TA86 221 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 FNDC9Q8TBE3 224 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 POC1BQ8TC44 478 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 C10orf82Q8WW14 230 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 RASSF5Q8WWW0 418 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 FIG4Q92562 907 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 CNOT9Q92600 299 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 RNASE6Q93091 150 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 MAL2Q969L2 176 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ZG16BQ96DA0 208 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 GMPPAQ96IJ6 420 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 FAM46AQ96IP4 442 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF845Q96IR2 970 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF317Q96PQ6 595 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SPOCK3Q9BQ16 436 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 CPPED1Q9BRF8 314 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SLC39A3Q9BRY0 314 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 TACO1Q9BSH4 297 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 RBM24Q9BX46 236 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 CLCF1Q9UBD9 225 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 CHRNA9Q9UGM1 479 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 PROCRQ9UNN8 238 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 SF3B6Q9Y3B4 125 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 GMEB1Q9Y692 573 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 FLNCQ14315 2725 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 DSPPQ9NZW4 1301 aa7.48□□□□□ -1.21
PSEN1-209ENST00000553855 ANKRD17O75179 2603 aaKnown RBP7.48□□□□□ -1.21
PSEN1-209ENST00000553855 HIVEP3Q5T1R4 2406 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 TRBV5-3A0A0A0MS03 114 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 A0A0J9YW62 118 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 CENPVL1A0A0U1RR11 272 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 A0A1W2PNV4 684 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 CDHR4A6H8M9 788 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 CLDN24A6NM45 220 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 B4DXG7 233 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 H0YC42 278 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SULT2B1O00204 365 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 FAAHO00519 579 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 MSTNO14793 375 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 CASKO14936 926 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 DCTN3O75935 186 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 PRKD3O94806 890 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 TGM6O95932 706 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 C1QCP02747 245 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SCG5P05408 212 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 CCNA2P20248 432 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 RPS4Y1P22090 263 aaKnown RBP7.47□□□□□ -1.21
PSEN1-209ENST00000553855 ENPP1P22413 925 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 PSMA4P25789 261 aaKnown RBP7.47□□□□□ -1.21
PSEN1-209ENST00000553855 GTF2E2P29084 291 aaKnown RBP7.47□□□□□ -1.21
PSEN1-209ENST00000553855 AQP1P29972 269 aa7.47□□□□□ -1.21
PSEN1-209ENST00000553855 SEC24CP53992 1094 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms