RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 RBM34P42696 430 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ACAA2P42765 397 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 YAP1P46937 504 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 IDH2P48735 452 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ALDH3A2P51648 485 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CCL11P51671 97 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 RPS6KA3P51812 740 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CRYBA2P53672 197 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 UCNP55089 124 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CDH12P55289 794 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 FBXW4P57775 412 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 OC90Q02509 493 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NFATC3Q12968 1075 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 PIN1Q13526 163 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 IL10RAQ13651 578 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 DGCR6Q14129 220 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CDSNQ15517 529 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TGIF1Q15583 401 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NPTX1Q15818 432 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 MAPK14Q16539 360 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 LRRC36Q1X8D7 754 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF791Q3KP31 576 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 IQCCQ4KMZ1 466 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 FGD3Q5JSP0 725 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 WLSQ5T9L3 541 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TTC23Q5W5X9 447 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 LPCAT4Q643R3 524 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 HMBOX1Q6NT76 420 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 C5orf46Q6UWT4 87 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 OLIG3Q7RTU3 272 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 MARCH3Q86UD3 253 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 APLFQ8IW19 511 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 OFCC1Q8IZS5 231 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 DHRSXQ8N5I4 330 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TMCO5AQ8N6Q1 288 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 SIRT6Q8N6T7 355 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 FAM86B1Q8N7N1 296 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ATG16L2Q8NAA4 619 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 POGLUT1Q8NBL1 392 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 FAM98AQ8NCA5 519 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 OR1J4Q8NGS1 313 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 OR5W2Q8NH69 310 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 B4GALNT2Q8NHY0 566 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 MAGEE2Q8TD90 523 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 BRIX1Q8TDN6 353 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 GNPDA2Q8TDQ7 276 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ADAMTS16Q8TE57 1224 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 PAQR8Q8TEZ7 354 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 DUSP19Q8WTR2 217 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 APOBEC4Q8WW27 367 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ZCCHC14Q8WYQ9 949 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TM9SF4Q92544 642 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CNOT9Q92600 299 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 HAS2Q92819 552 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 HGDQ93099 445 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ARSGQ96EG1 525 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 SLC41A3Q96GZ6 507 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NODALQ96S42 347 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CIB1Q99828 191 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 PSD2Q9BQI7 771 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 OSBPL11Q9BXB4 747 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TEX12Q9BXU0 123 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ANGPTL4Q9BY76 406 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NDEL1Q9GZM8 345 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ING2Q9H160 280 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CXorf56Q9H5V9 222 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 COQ10BQ9H8M1 238 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 SERINC1Q9NRX5 453 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ACER3Q9NUN7 267 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 RLIMQ9NVW2 624 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TAS2R10Q9NYW0 307 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 USE1Q9NZ43 259 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 PDP1Q9P0J1 537 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 KIF17Q9P2E2 1029 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 KCNE5Q9UJ90 142 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 RAB26Q9ULW5 256 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 OAZ3Q9UMX2 235 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 A4GNTQ9UNA3 340 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TMEM5Q9Y2B1 443 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CARD8Q9Y2G2 431 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 TESMINQ9Y4I5 508 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 LYVE1Q9Y5Y7 322 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 HEATR5AQ86XA9 2040 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 AHCTF1Q8WYP5 2266 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 A0A087WZY1 265 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 IGLV3-32A0A0A0MS00 114 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ANKUB1A6NFN9 424 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 H0YAE9 185 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 J3KTA2 159 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 M0R3H8 397 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 NKX2-8O15522 239 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 KLF4O43474 513 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CHP2O43745 196 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SCO2O43819 266 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR2T1O43869 369 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR10H3O60404 316 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CDC40O60508 579 aaKnown RBP eCLIP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SLC25A12O75746 678 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR6B1O95007 311 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 DIRAS1O95057 198 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms