RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TRBV5-3A0A0A0MS03 114 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 DPRXA6NFQ7 191 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 CLOCKO15516 846 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 RAD51DO75771 328 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 AKR7A3O95154 331 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 GOSR1O95249 250 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 SLC1A3P43003 542 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 CRISP3P54108 245 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 STX1BP61266 288 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 LRRC74AQ0VAA2 488 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 CEACAM7Q14002 265 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 CAPRIN1Q14444 709 aaKnown RBP16.09■□□□□ 0.17
SHMT2-206ENST00000553529 LIN52Q52LA3 116 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 LRIF1Q5T3J3 769 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 MSANTD1Q6ZTZ1 278 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 GALNT5Q7Z7M9 940 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 RETREG3Q86VR2 466 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 CMIPQ8IY22 773 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 TMEM99Q8N816 258 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 SLC25A43Q8WUT9 341 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-206ENST00000553529 IGFBPL1Q8WX77 278 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 AKAP1Q92667 903 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHMT2-206ENST00000553529 KISS1RQ969F8 398 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-206ENST00000553529 TMEM204Q9BSN7 226 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 CCDC28BQ9BUN5 200 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 ZNF385DQ9H6B1 395 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 NPHS2Q9NP85 383 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 TMEM181Q9P2C4 612 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 DSCAMO60469 2012 aa16.09■□□□□ 0.17
SHMT2-206ENST00000553529 IGKV3D-15A0A087WSY6 115 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 TRIM64A6NGJ6 449 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 TRIM64BA6NI03 449 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF724A8MTY0 619 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 HTR2AP28223 471 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 AQP1P29972 269 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 MRPL19P49406 292 aaKnown RBP16.08■□□□□ 0.16
SHMT2-206ENST00000553529 CSNK2A1P68400 391 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-206ENST00000553529 H3F3AP84243 136 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 ITGADQ13349 1161 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 OR7A5Q15622 319 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 ADAM5Q6NVV9 412 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 Q6ZT83 130 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 HDXQ7Z353 690 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF100Q8IYN0 542 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF385AQ96PM9 386 aaKnown RBP16.08■□□□□ 0.16
SHMT2-206ENST00000553529 A4GALTQ9NPC4 353 aa16.08■□□□□ 0.16
SHMT2-206ENST00000553529 BEX4Q9NWD9 120 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-206ENST00000553529 NOSIPQ9Y314 301 aaKnown RBP16.08■□□□□ 0.16
SHMT2-206ENST00000553529 PGM3O95394 542 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 COX5AP20674 150 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 ANXA11P50995 505 aaKnown RBP16.07■□□□□ 0.16
SHMT2-206ENST00000553529 NR1H2P55055 460 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 SLC25A3Q00325 362 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 BSPH1Q075Z2 132 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF311Q5JNZ3 666 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 RNF220Q5VTB9 566 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 DLEU7Q6UYE1 221 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 UBE2J2Q8N2K1 259 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF433Q8N7K0 673 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-206ENST00000553529 ZIC4Q8N9L1 334 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 STEAP2Q8NFT2 490 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 OR52N5Q8NH56 324 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 OIT3Q8WWZ8 545 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 C3orf49Q96BT1 292 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 CPPED1Q9BRF8 314 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-206ENST00000553529 C1QTNF6Q9BXI9 259 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 GP6Q9HCN6 339 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF446Q9NWS9 450 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 HDGFL3Q9Y3E1 203 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 FLVCR1Q9Y5Y0 555 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 SPIN1Q9Y657 262 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-206ENST00000553529 ACANP16112 2415 aa16.07■□□□□ 0.16
SHMT2-206ENST00000553529 LIPT2A6NK58 231 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 HMGB1P1B2RPK0 211 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-206ENST00000553529 FAAHO00519 579 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 SMPD2O60906 423 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 TGDSO95455 350 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 SOD3P08294 240 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 ITGA5P08648 1049 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 ARAFP10398 606 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 BMP2P12643 396 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 PPP3CBP16298 524 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 NCF2P19878 526 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-206ENST00000553529 P2RY4P51582 365 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 FAPQ12884 760 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 SQLEQ14534 574 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 ADRM1Q16186 407 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 NCMAPQ5T1S8 102 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 GCNT6Q5T4J0 391 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 TSPO2Q5TGU0 170 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 CGB2Q6NT52 195 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 CASP12Q6UXS9 341 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 KDM8Q8N371 416 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 DDIT4LQ96D03 193 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 MAGEB18Q96M61 343 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 Q96MF0 132 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 SPATA9Q9BWV2 254 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 ADPRHL2Q9NX46 363 aa16.06■□□□□ 0.16
SHMT2-206ENST00000553529 A0A0G2JPF8 293 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms