RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CLK1P49759 484 aaKnown RBP14.06□□□□□ -0.16
CDK4-215ENST00000553237 EPS8Q12929 822 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 ZNF836Q6ZNA1 936 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 MSANTD1Q6ZTZ1 278 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 LRRC75A-AS1Q8N1F1 130 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 UBE2J2Q8N2K1 259 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 AKAP1Q92667 903 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDK4-215ENST00000553237 GTF2H4Q92759 462 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 PMM1Q92871 262 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 TMEM204Q9BSN7 226 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 PAIP1Q9H074 479 aaKnown RBP14.06□□□□□ -0.16
CDK4-215ENST00000553237 CALML5Q9NZT1 146 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 EMC3Q9P0I2 261 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 TMEM181Q9P2C4 612 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 NOSIPQ9Y314 301 aaKnown RBP14.06□□□□□ -0.16
CDK4-215ENST00000553237 PCDHB14Q9Y5E9 798 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 IGKV3D-15A0A087WSY6 115 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 ZC3H12DA2A288 527 aaKnown RBP14.05□□□□□ -0.16
CDK4-215ENST00000553237 CDHR4A6H8M9 788 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 HS3ST1O14792 307 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 ATP8B1O43520 1251 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 NUDT7P0C024 238 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 IMPDH2P12268 514 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 UQCRBP14927 111 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 NTF4P34130 210 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 MAGEA8P43361 318 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 CRISP3P54108 245 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 PDK3Q15120 406 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 LIN52Q52LA3 116 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 NCMAPQ5T1S8 102 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 Q71RC1 249 aaPredicted RBP14.05□□□□□ -0.16
CDK4-215ENST00000553237 YTHDF3Q7Z739 585 aaKnown RBP14.05□□□□□ -0.16
CDK4-215ENST00000553237 FUNDC1Q8IVP5 155 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 CLIP4Q8N3C7 705 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 CADM2Q8N3J6 435 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 PIGXQ8TBF5 258 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 STON2Q8WXE9 905 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 NEUROG1Q92886 237 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 DDIT4LQ96D03 193 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 TMEM19Q96HH6 336 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 C18orf12Q96KH6 178 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 POTEKPQ9BYX7 375 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 NGBQ9NPG2 151 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 CCDC167Q9P0B6 97 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 TRAPPC4Q9Y296 219 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 ZNF443Q9Y2A4 671 aaPredicted RBP14.05□□□□□ -0.16
CDK4-215ENST00000553237 RNF115Q9Y4L5 304 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 NF1P21359 2839 aa14.05□□□□□ -0.16
CDK4-215ENST00000553237 A0A0G2JND7 137 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 CLIC1O00299 241 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 FAAHO00519 579 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 ZNF208O43345 1280 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 CD3EP07766 207 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 NCF2P19878 526 aaPredicted RBP14.04□□□□□ -0.16
CDK4-215ENST00000553237 ADSLP30566 484 aaPredicted RBP14.04□□□□□ -0.16
CDK4-215ENST00000553237 ACAA2P42765 397 aaKnown RBP14.04□□□□□ -0.16
CDK4-215ENST00000553237 ATP4BP51164 291 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 SLC35A1P78382 337 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 GUCY1A3Q02108 690 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 SQLEQ14534 574 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 FBXW9Q5XUX1 488 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 BLOC1S3Q6QNY0 202 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 ZNF440Q8IYI8 595 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 ZNF611Q8N823 705 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 LILRB1Q8NHL6 650 aaPredicted RBP14.04□□□□□ -0.16
CDK4-215ENST00000553237 TMEM171Q8WVE6 324 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 MAL2Q969L2 176 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 APH1AQ96BI3 265 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 Q96MF0 132 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 USB1Q9BQ65 265 aaKnown RBP14.04□□□□□ -0.16
CDK4-215ENST00000553237 ADAM19Q9H013 955 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 ESRP2Q9H6T0 727 aaKnown RBP14.04□□□□□ -0.16
CDK4-215ENST00000553237 ZNF232Q9UNY5 417 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 DSPPQ9NZW4 1301 aa14.04□□□□□ -0.16
CDK4-215ENST00000553237 TMEM247A6NEH6 219 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 DPRXA6NFQ7 191 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 CCT8L1PA6NM43 557 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 NR5A2O00482 541 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 GPR171O14626 319 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 DNPH1O43598 174 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 MRPL33O75394 65 aaKnown RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 VIMP08670 466 aaKnown RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 INHBBP09529 407 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 PRG2P13727 222 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 GGT1P19440 569 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 CXCR1P25024 350 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 PTH2RP49190 550 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 H3F3AP84243 136 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 BSPH1Q075Z2 132 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 BNIP2Q12982 314 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 LARS2Q15031 903 aaKnown RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 PPA1Q15181 289 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 RGNQ15493 299 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 AGKQ53H12 422 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 SEZ6L2Q6UXD5 910 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 CIARTQ8N365 385 aaPredicted RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 ZNF433Q8N7K0 673 aaPredicted RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 IGFBPL1Q8WX77 278 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 SPDL1Q96EA4 605 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 SIKE1Q9BRV8 207 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms