RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 GSTA4O15217 222 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ZG16O60844 167 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 TGM6O95932 706 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 OPN1LWP04000 364 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 CEACAM8P31997 349 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 MSX2P35548 267 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 TIMP3P35625 211 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 MAP2K6P52564 334 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 EGR4Q05215 589 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 GUSBP1Q15486 140 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 CDSNQ15517 529 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 OR1Q1Q15612 314 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 TMEM176BQ3YBM2 270 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ENTPD8Q5MY95 495 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 RIPPLY2Q5TAB7 128 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 GLYATQ6IB77 296 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 MTFR2Q6P444 385 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 PGM2L1Q6PCE3 622 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ZNF613Q6PF04 617 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 POMZP3Q6PJE2 187 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 WDR88Q6ZMY6 472 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 TSEN54Q7Z6J9 526 aaKnown RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 OR10Q1Q8NGQ4 319 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 PROX1Q92786 737 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 FAM162AQ96A26 154 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 CLPTM1LQ96KA5 538 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ARL5BQ96KC2 179 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 RAB3IPQ96QF0 476 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 TRIB1Q96RU8 372 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 MCHR1Q99705 422 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ZNF426Q9BUY5 554 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 PTDSS2Q9BVG9 487 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 TRIM2Q9C040 744 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 DCAF13Q9NV06 445 aaKnown RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ADPRHL2Q9NX46 363 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 RPS6KA6Q9UK32 745 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 SLC13A4Q9UKG4 626 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 SAMD4AQ9UPU9 718 aaKnown RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 SLC9A8Q9Y2E8 581 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ZNF175Q9Y473 711 aa8.18□□□□□ -1.1
CCDC59-207ENST00000552606 SPIN1Q9Y657 262 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 SPTBN1Q01082 2364 aaKnown RBP8.18□□□□□ -1.1
CCDC59-207ENST00000552606 ICE1Q9Y2F5 2266 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 LRRK2Q5S007 2527 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 A0A087WUJ7 227 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 A0A0G2JNJ9 132 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 TCRBV5S2A0A599 114 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 SLC22A20A6NK97 555 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 CPSF4LA6NMK7 179 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 GSC2O15499 205 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 CHP2O43745 196 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 CXCL13O43927 109 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 AQP8O94778 261 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 AGFG2O95081 481 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 PRSS23O95084 383 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 PMS2P2O95744 297 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 ZNF682O95780 498 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 IMPDH2P12268 514 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 KLK2P20151 261 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 EIF1AXP47813 144 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 OR1E2P47887 323 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 CDH12P55289 794 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 PER3P56645 1201 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 RPS3AP61247 264 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 COPZ1P61923 177 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 MS4A2Q01362 244 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 PMPCAQ10713 525 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 MYBPHQ13203 477 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 TRIM25Q14258 630 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 PON3Q15166 354 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 SF3B4Q15427 424 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 IQCCQ4KMZ1 466 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 ALG10BQ5I7T1 473 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 HBMQ6B0K9 141 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 ABLIM2Q6H8Q1 611 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 TMEM211Q6ICI0 200 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 ULK3Q6PHR2 472 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 FNDC9Q8TBE3 224 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 ADAMTS16Q8TE57 1224 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 RNF128Q8TEB7 428 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 SSC4DQ8WTU2 575 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 DNAJA4Q8WW22 397 aaPredicted RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 GEMIN6Q8WXD5 167 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 LZICQ8WZA0 190 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 SLC38A4Q969I6 547 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 CPNE4Q96A23 557 aaPredicted RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 TPD52L3Q96J77 140 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 ZFP3Q96NJ6 502 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 OR5B2Q96R09 309 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 CADM1Q9BY67 442 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 AMBRA1Q9C0C7 1298 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 POLR2J2Q9GZM3 115 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 POLR2J3Q9H1A7 115 aaKnown RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 RNF122Q9H9V4 155 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 SERINC1Q9NRX5 453 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 PAQR5Q9NXK6 330 aaPredicted RBP8.17□□□□□ -1.1
CCDC59-207ENST00000552606 ALKBH4Q9NXW9 302 aa8.17□□□□□ -1.1
CCDC59-207ENST00000552606 STOML1Q9UBI4 398 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms