RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	CD274	Q9NZQ7	290 aa		3.69	□□□□□ -1.82
USP44-208	ENST00000552440	KLRF1	Q9NZS2	232 aa		3.69	□□□□□ -1.82
USP44-208	ENST00000552440	PRG3	Q9Y2Y8	225 aa	Predicted RBP	3.69	□□□□□ -1.82
USP44-208	ENST00000552440	CDH10	Q9Y6N8	788 aa		3.69	□□□□□ -1.82
USP44-208	ENST00000552440	PTPRT	O14522	1441 aa		3.69	□□□□□ -1.82
USP44-208	ENST00000552440	UHRF1BP1L	A0JNW5	1464 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	GOLGA6L10	A6NI86	522 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440		G3V4G9	280 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440		H0YJX3	145 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440		M0QXV9	152 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SIRPB1	O00241	398 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CCS	O14618	274 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	TFEC	O14948	347 aa	Predicted RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	AQP9	O43315	295 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	PCDH7	O60245	1069 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	NDUFS7	O75251	213 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	LDOC1	O95751	146 aa	Predicted RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	LATS1	O95835	1130 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ACTL6A	O96019	429 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CA1	P00915	261 aa	Predicted RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CRYAB	P02511	175 aa	Known RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	NPR2	P20594	1047 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	PRPS1L1	P21108	318 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	HSD11B1	P28845	292 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	MAGEA6	P43360	314 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	GNPDA1	P46926	289 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CX3CR1	P49238	355 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	HLCS	P50747	726 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CDKL1	Q00532	357 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	TAF10	Q12962	218 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	VGLL4	Q14135	290 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	MS4A18	Q3C1V0	323 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SLC25A52	Q3SY17	297 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	TP53I3	Q53FA7	332 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	TCHHL1	Q5QJ38	904 aa	Predicted RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	BEND6	Q5SZJ8	279 aa	Predicted RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	MARCH8	Q5T0T0	291 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	PLPP4	Q5VZY2	271 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	BSPRY	Q5W0U4	402 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ADNP2	Q6IQ32	1131 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CD300LG	Q6UXG3	332 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ZNF788	Q6ZQV5	615 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	C1QL2	Q7Z5L3	287 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CTU1	Q7Z7A3	348 aa	Known RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ITIH5	Q86UX2	942 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SLC13A5	Q86YT5	568 aa	Predicted RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	RCOR2	Q8IZ40	523 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SPAG16	Q8N0X2	631 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CCNYL1	Q8N7R7	359 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CDRT4	Q8N9R6	151 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	MRAP	Q8TCY5	172 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CD99L2	Q8TCZ2	262 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	GPR151	Q8TDV0	419 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	GPR148	Q8TDV2	347 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SLC35F5	Q8WV83	523 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	DNAJB3	Q8WWF6	145 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	MYDGF	Q969H8	173 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ISOC2	Q96AB3	205 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SARAF	Q96BY9	339 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CNN2	Q99439	309 aa	Known RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ECSIT	Q9BQ95	431 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	IKZF5	Q9H5V7	419 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SIRT7	Q9NRC8	400 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ABCB10	Q9NRK6	738 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	MRPL39	Q9NYK5	338 aa	Known RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SIGLEC8	Q9NYZ4	499 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	IL36A	Q9UHA7	158 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ZNF221	Q9UK13	617 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	MYO6	Q9UM54	1294 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	HYOU1	Q9Y4L1	999 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	TBL2	Q9Y4P3	447 aa	Known RBP	3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CUX1	P39880	1505 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	USP47	Q96K76	1375 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	PTPRC	P08575	1304 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	SRCAP	Q6ZRS2	3230 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	ADAMTS12	P58397	1594 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	CD109	Q6YHK3	1445 aa		3.68	□□□□□ -1.82
USP44-208	ENST00000552440	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	3.67	□□□□□ -1.82
USP44-208	ENST00000552440		A0A1B0GTI1	187 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440		F5H6K3	240 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440		F8VP50	259 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	SMIM22	K7EJ46	135 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	MSH4	O15457	936 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	PSTPIP1	O43586	416 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	SYNGR3	O43761	229 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	NADK	O95544	446 aa	Predicted RBP	3.67	□□□□□ -1.82
USP44-208	ENST00000552440	ASS1	P00966	412 aa	Known RBP	3.67	□□□□□ -1.82
USP44-208	ENST00000552440	FGG	P02679	453 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	PRKCG	P05129	697 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	GP1BA	P07359	652 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	MBL2	P11226	248 aa	Predicted RBP	3.67	□□□□□ -1.82
USP44-208	ENST00000552440	PSMB5	P28074	263 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	MAS1L	P35410	378 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	GPR1	P46091	355 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	RPL14	P50914	215 aa	Known RBP	3.67	□□□□□ -1.82
USP44-208	ENST00000552440	MNAT1	P51948	309 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	PLK1	P53350	603 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	PKNOX1	P55347	436 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	ERVK11-1	P61568	191 aa		3.67	□□□□□ -1.82
USP44-208	ENST00000552440	RPS6	P62753	249 aa	Known RBP	3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms