RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 NEUROG2Q9H2A3 272 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 SYT4Q9H2B2 425 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 PPA2Q9H2U2 334 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 OR51M1Q9H341 326 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 EBF3Q9H4W6 596 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 THSD1Q9NS62 852 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 ZNF221Q9UK13 617 aa5.51□□□□□ -1.53
VPS29-210ENST00000552130 TBL2Q9Y4P3 447 aaKnown RBP5.51□□□□□ -1.53
VPS29-210ENST00000552130 AQRO60306 1485 aaKnown RBP eCLIP5.51□□□□□ -1.532e-6■■■■□ 21.4
VPS29-210ENST00000552130 A0A1B0GTI1 187 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 LINC00473A8K010 186 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 E5RI56 91 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 M0QXV9 152 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 P2RX6O15547 441 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 ATP5LO75964 103 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 TOXO94900 526 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 NADKO95544 446 aaPredicted RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 ACTL6AO96019 429 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 ASS1P00966 412 aaKnown RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 FGGP02679 453 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 ATP1A1P05023 1023 aaKnown RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 FABP1P07148 127 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 PET100P0DJ07 73 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 GP1BBP13224 206 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 GCAP28676 217 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 RPL14P50914 215 aaKnown RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 MNAT1P51948 309 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 PLK1P53350 603 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 UBE2KP61086 200 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 HOXA4Q00056 320 aaPredicted RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 PAX2Q02962 417 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 ZNF33AQ06730 810 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 MED21Q13503 144 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 OR4D1Q15615 310 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 PAPPA-AS1Q5QFB9 102 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 ASPHD1Q5U4P2 390 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 C1orf189Q5VU69 101 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 OR4C11Q6IEV9 310 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 ZNF425Q6IV72 752 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 Q6ZSR3 168 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 FCRLAQ7L513 359 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 TBC1D19Q8N5T2 526 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 OR8K1Q8NGG5 319 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 CNIH3Q8TBE1 160 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 WFIKKN2Q8TEU8 576 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 SMAP2Q8WU79 429 aaPredicted RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 DNAJB3Q8WWF6 145 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 TFGQ92734 400 aaPredicted RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 ART4Q93070 314 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 SLC35B4Q969S0 331 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 UBE2E3Q969T4 207 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 PNPLA2Q96AD5 504 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 EME1Q96AY2 570 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 NXPE2Q96DL1 559 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 MYEOVQ96EZ4 313 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 CDCA3Q99618 268 aaPredicted RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 PIGUQ9H490 435 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 TUBB1Q9H4B7 451 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 SLC25A19Q9HC21 320 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 BFARQ9NZS9 450 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 PILRBQ9UKJ0 227 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 EIF3LQ9Y262 564 aaKnown RBP5.5□□□□□ -1.53
VPS29-210ENST00000552130 AUP1Q9Y679 476 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 V9GYY9 64 aa5.5□□□□□ -1.53
VPS29-210ENST00000552130 FNDC1Q4ZHG4 1894 aaPredicted RBP5.49□□□□□ -1.53
VPS29-210ENST00000552130 NSG1A0A0A6YYJ2 146 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 A0A1W2PRF3 423 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 A0A1W2PRM7 423 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 A8MVM7 634 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 LMO7DNF2Z398 122 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 PRMT5O14744 637 aaPredicted RBP5.49□□□□□ -1.53
VPS29-210ENST00000552130 EPHB6O15197 1021 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 RGS16O15492 202 aaPredicted RBP5.49□□□□□ -1.53
VPS29-210ENST00000552130 KIAA0513O60268 411 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 ANXA9O76027 345 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 VAMP5O95183 116 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 IFNA14P01570 189 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 IGHG3P01860 377 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 KLK1P06870 262 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 H2AFXP16104 143 aaPredicted RBP5.49□□□□□ -1.53
VPS29-210ENST00000552130 PSMC3P17980 439 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 XRCC1P18887 633 aaPredicted RBP5.49□□□□□ -1.53
VPS29-210ENST00000552130 LHCGRP22888 699 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 IVDP26440 423 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 G0S2P27469 103 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 PSMB5P28074 263 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 CD38P28907 300 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 MAS1LP35410 378 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 NSG1P42857 185 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 SLC1A1P43005 524 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 QARSP47897 775 aaKnown RBP5.49□□□□□ -1.53
VPS29-210ENST00000552130 RGS6P49758 472 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 ERVK11-1P61568 191 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 S100A12P80511 92 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 PDK2Q15119 407 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 ZBTB6Q15916 424 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 SOHLH1Q5JUK2 328 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 C1orf220Q5T0J3 134 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 PDSS1Q5T2R2 415 aa5.49□□□□□ -1.53
VPS29-210ENST00000552130 DCAF12Q5T6F0 453 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms