RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 OPN3Q9H1Y3 402 aaPredicted RBP4.54□□□□□ -1.68
HCFC2-204ENST00000550335 RHBGQ9H310 441 aa4.54□□□□□ -1.68
HCFC2-204ENST00000550335 PPDPFQ9H3Y8 114 aa4.54□□□□□ -1.68
HCFC2-204ENST00000550335 CAB39LQ9H9S4 337 aa4.54□□□□□ -1.68
HCFC2-204ENST00000550335 POPDC2Q9HBU9 364 aa4.54□□□□□ -1.68
HCFC2-204ENST00000550335 PRPF19Q9UMS4 504 aaKnown RBP4.54□□□□□ -1.68
HCFC2-204ENST00000550335 ATP7BP35670 1465 aa4.54□□□□□ -1.68
HCFC2-204ENST00000550335 TRPM1Q7Z4N2 1603 aa4.54□□□□□ -1.68
HCFC2-204ENST00000550335 USP32Q8NFA0 1604 aa4.54□□□□□ -1.68
HCFC2-204ENST00000550335 NSD2O96028 1365 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 CNTNAP2Q9UHC6 1331 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 IGHV2-70DA0A0C4DH43 119 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 VSTM2BA6NLU5 285 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 OR52A4PA6NMU1 304 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 ZNF716A6NP11 495 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 NBR2O15453 112 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 TAPBPO15533 448 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 PHF1O43189 567 aaPredicted RBP4.53□□□□□ -1.68
HCFC2-204ENST00000550335 KLHL41O60662 606 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 ZNF253O75346 499 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 WBP4O75554 376 aaKnown RBP4.53□□□□□ -1.68
HCFC2-204ENST00000550335 SCRG1O75711 98 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 UGT2B17O75795 530 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 AP2A1O95782 977 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 TSPAN12O95859 305 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 PGK1P00558 417 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 ZNF735P0CB33 412 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 RNH1P13489 461 aaKnown RBP4.53□□□□□ -1.68
HCFC2-204ENST00000550335 ANXA13P27216 316 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 HOXD10P28358 340 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 XCR1P46094 333 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 TDO2P48775 406 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 HLCSP50747 726 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 PRELPP51888 382 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 EFNB2P52799 333 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 PLD1Q13393 1074 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 FAM199XQ6PEV8 388 aaPredicted RBP4.53□□□□□ -1.68
HCFC2-204ENST00000550335 SLC47A2Q86VL8 602 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 TTC5Q8N0Z6 440 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 RASL10AQ92737 203 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 EFHD2Q96C19 240 aaPredicted RBP4.53□□□□□ -1.68
HCFC2-204ENST00000550335 FAF2Q96CS3 445 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 CELF6Q96J87 481 aaKnown RBP4.53□□□□□ -1.68
HCFC2-204ENST00000550335 OR5M11Q96RB7 305 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 PSMB7Q99436 277 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 MIEF1Q9NQG6 463 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 SCML2Q9UQR0 700 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 NPTNQ9Y639 398 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 RALGAPBQ86X10 1494 aa4.53□□□□□ -1.68
HCFC2-204ENST00000550335 SLIT2O94813 1529 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 PRR23D1E9PI22 279 aaPredicted RBP4.52□□□□□ -1.69
HCFC2-204ENST00000550335 SULT2B1O00204 365 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ZNF264O43296 627 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 PFKFB2O60825 505 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 IGHV3-13P01766 116 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 RNF224P0DH78 156 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 PRR23D2P0DMB1 279 aaPredicted RBP4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CT45A10P0DMU9 189 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CAPN2P17655 700 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 IGFBP5P24593 272 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CCNCP24863 283 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ADORA2BP29275 332 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 FGF9P31371 208 aaPredicted RBP4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CCR1P32246 355 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ELK3P41970 407 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ATP5OP48047 213 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 SUCLG1P53597 346 aaKnown RBP4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CDH4P55283 916 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ERVPABLB-1P60509 514 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 RUNX3Q13761 415 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 DPYSL3Q14195 570 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CCDC137Q6PK04 289 aaKnown RBP4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ZNF600Q6ZNG1 722 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 C19orf35Q6ZS72 473 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 STXBP4Q6ZWJ1 553 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ALLCQ8N6M5 410 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 OR52K2Q8NGK3 314 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CCDC26Q8TAB7 109 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 SLC2A14Q8TDB8 520 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 TOMM40LQ969M1 308 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ZNF689Q96CS4 500 aaPredicted RBP4.52□□□□□ -1.69
HCFC2-204ENST00000550335 RASD2Q96D21 266 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 CLCC1Q96S66 551 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 FMO2Q99518 471 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 GNB4Q9HAV0 340 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 BFARQ9NZS9 450 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 SPATA7Q9P0W8 599 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 RSPH14Q9UHP6 348 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 TMED5Q9Y3A6 229 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 ITSN1Q15811 1721 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 NINLQ9Y2I6 1382 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 GON4LQ3T8J9 2241 aa4.52□□□□□ -1.69
HCFC2-204ENST00000550335 BCL9LQ86UU0 1499 aa4.51□□□□□ -1.69
HCFC2-204ENST00000550335 E7ESA3 106 aa4.51□□□□□ -1.69
HCFC2-204ENST00000550335 F5H6K3 240 aa4.51□□□□□ -1.69
HCFC2-204ENST00000550335 LSM1O15116 133 aaKnown RBP4.51□□□□□ -1.69
HCFC2-204ENST00000550335 OR10H3O60404 316 aa4.51□□□□□ -1.69
HCFC2-204ENST00000550335 GPX5O75715 221 aa4.51□□□□□ -1.69
HCFC2-204ENST00000550335 KBTBD11O94819 623 aa4.51□□□□□ -1.69
HCFC2-204ENST00000550335 GJB5O95377 273 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms