RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ANKRD46Q86W74 232 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 MIPOL1Q8TD10 442 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 TCP10LQ8TDR4 215 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 ROPN1LQ96C74 230 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 AMBRA1Q9C0C7 1298 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 SLC17A5Q9NRA2 495 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 SLC7A10Q9NS82 523 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 PRAMEF27A3QJZ7 478 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 ATP6V1G2-DDX39BF2Z307 99 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 RNASET2O00584 256 aaKnown RBP13.49□□□□□ -0.25
RAB5C-205ENST00000550013 DNPH1O43598 174 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 CPSF4O95639 269 aaKnown RBP13.49□□□□□ -0.25
RAB5C-205ENST00000550013 C1QCP02747 245 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 USF1P22415 310 aaPredicted RBP13.49□□□□□ -0.25
RAB5C-205ENST00000550013 SERPINB5P36952 375 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 MAGEA8P43361 318 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 IDH2P48735 452 aaKnown RBP13.49□□□□□ -0.25
RAB5C-205ENST00000550013 H3F3AP84243 136 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 EMX2Q04743 252 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 ATAD3BQ5T9A4 648 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 IL17RELQ6ZVW7 336 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 ARFGAP2Q8N6H7 521 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 EIF1ADQ8N9N8 165 aaKnown RBP13.49□□□□□ -0.25
RAB5C-205ENST00000550013 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
RAB5C-205ENST00000550013 PROX1Q92786 737 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 PPP1R36Q96LQ0 422 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 SAP130Q9H0E3 1048 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 SHARPINQ9H0F6 387 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 FKRPQ9H9S5 495 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 ASIC5Q9NY37 505 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 NOP53Q9NZM5 478 aaKnown RBP13.49□□□□□ -0.25
RAB5C-205ENST00000550013 TMEM181Q9P2C4 612 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 UPB1Q9UBR1 384 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 LPAR3Q9UBY5 353 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 FLVCR1Q9Y5Y0 555 aa13.49□□□□□ -0.25
RAB5C-205ENST00000550013 TMED7-TICAM2A0A0A6YYA0 188 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 LMX1BO60663 402 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 SCN2BO60939 215 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 GUSBP08236 651 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 CSF3P09919 207 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 IMPDH2P12268 514 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 IGFBP5P24593 272 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 APOBEC3AP31941 199 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-205ENST00000550013 CLK1P49759 484 aaKnown RBP13.48□□□□□ -0.25
RAB5C-205ENST00000550013 PHC1P78364 1004 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 KCNJ10P78508 379 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 LSM11P83369 360 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAB5C-205ENST00000550013 CHRNB3Q05901 458 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 MAD2L1Q13257 205 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-205ENST00000550013 TSPO2Q5TGU0 170 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 OR8J2Q8NGG1 315 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 FBXO17Q96EF6 278 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 EXOSC3Q9NQT5 275 aaKnown RBP13.48□□□□□ -0.25
RAB5C-205ENST00000550013 POLE3Q9NRF9 147 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-205ENST00000550013 DCTN4Q9UJW0 460 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 PCDHGB4Q9UN71 923 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 TRAPPC4Q9Y296 219 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 SLC9A8Q9Y2E8 581 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 AMDHD2Q9Y303 409 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 TMED7Q9Y3B3 224 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 PMF1-BGLAPU3KQ54 211 aa13.48□□□□□ -0.25
RAB5C-205ENST00000550013 TMEM72A0PK05 275 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 ZC3H12DA2A288 527 aaKnown RBP13.47□□□□□ -0.25
RAB5C-205ENST00000550013 SLC35F4A4IF30 521 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 AGR2O95994 175 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 BPGMP07738 259 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 CREB1P16220 341 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 UQCRC2P22695 453 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 KHKP50053 298 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 SLC35A1P78382 337 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 GGTLC2Q14390 218 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 SLC17A1Q14916 467 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-205ENST00000550013 MST1LQ2TV78 715 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 GPAT3Q53EU6 434 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 SAXO2Q658L1 398 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 C17orf78Q8N4C9 275 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 C1orf162Q8NEQ5 155 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-205ENST00000550013 OIT3Q8WWZ8 545 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 C19orf24Q9BVV8 132 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 DPY30Q9C005 99 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 AKTIPQ9H8T0 292 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 CHODLQ9H9P2 273 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 OSGIN1Q9UJX0 560 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 MOKQ9UQ07 419 aa13.47□□□□□ -0.25
RAB5C-205ENST00000550013 VWC2LB2RUY7 222 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 KLF11O14901 512 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 ITM2AO43736 263 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 BMP4P12644 408 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 SRD5A1P18405 259 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 CDH2P19022 906 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-205ENST00000550013 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.25
RAB5C-205ENST00000550013 TACR3P29371 465 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 GZMKP49863 264 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 PDLIM4P50479 330 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 POLR2HP52434 150 aaKnown RBP13.46□□□□□ -0.25
RAB5C-205ENST00000550013 SWI5Q1ZZU3 235 aa13.46□□□□□ -0.25
RAB5C-205ENST00000550013 HIKESHIQ53FT3 197 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms