RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ZMYND19Q96E35 227 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 APOBEC3BQ9UH17 382 aaKnown RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 CA5BQ9Y2D0 317 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 C5orf67F2Z3F1 127 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 TOR1AO14656 332 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 LPLP06858 475 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 GIPP09681 153 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 TYRP1P17643 537 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 C4BPBP20851 252 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 MAT2AP31153 395 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 FAM109BQ6ICB4 259 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 ERN2Q76MJ5 926 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 OR52H1Q8NGJ2 320 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 OR51L1Q8NGJ5 315 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 CXorf40AQ8TE69 158 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 MS4A4EQ96PG1 132 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 INSM2Q96T92 566 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 GFI1Q99684 422 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 PLEKHA1Q9HB21 404 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 NOX3Q9HBY0 568 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 MRPS30Q9NP92 439 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 ANKRD10Q9NXR5 420 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 SESN1Q9Y6P5 492 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 TCRBV16S1A1N1A0A5B0 115 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 MCRIP1C9JLW8 97 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 OGG1O15527 345 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 KHDRBS3O75525 346 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF3P17036 446 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 NFYAP23511 347 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 IL32P24001 234 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 NAA10P41227 235 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 CLDN12P56749 244 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 PSMA6P60900 246 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 SNRPNP63162 240 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 ACTC1P68032 377 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 ACTA1P68133 377 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF273Q14593 569 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 CEBPEQ15744 281 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 LINC00303Q3SY05 128 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 ELFN2Q5R3F8 820 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 MRPL2Q5T653 305 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 OVCH2Q7RTZ1 564 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 HDDC3Q8N4P3 179 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 SPICQ8N5J4 248 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 OR4C6Q8NH72 309 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 CD93Q9NPY3 652 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 NRIP3Q9NQ35 241 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 USP36Q9P275 1121 aaKnown RBP12.66□□□□□ -0.38
HDAC7-228ENST00000548938 PCDHGA5Q9Y5G8 931 aa12.66□□□□□ -0.38
HDAC7-228ENST00000548938 DUXAA6NLW8 204 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 SUSD5O60279 629 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 GALR3O60755 368 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-228ENST00000548938 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 RAB28P51157 221 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 CDK3Q00526 305 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 EIPR1Q53HC9 387 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 STPG1Q5TH74 334 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 RTL10Q7L3V2 364 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 OVCH1Q7RTY7 1134 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 GRASPQ7Z6J2 395 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-228ENST00000548938 MEPEQ9NQ76 525 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-228ENST00000548938 POT1Q9NUX5 634 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 SCN3AQ9NY46 2000 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 TRBV2A0A0J9YWF9 115 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 OR2M5A3KFT3 312 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 PRRT4C9JH25 899 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 GABARAPH6UMI1 98 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 PEX12O00623 359 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 KRT33AO76009 404 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 FGF19O95750 216 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 FCER2P06734 321 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 IFNGR1P15260 489 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 DDX6P26196 483 aaKnown RBP eCLIP12.65□□□□□ -0.383e-29■□□□□ 8.4
HDAC7-228ENST00000548938 DCTDP32321 178 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 PSMB10P40306 273 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 MAGEB1P43366 347 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 RAP2BP61225 183 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 HLXQ14774 488 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-228ENST00000548938 FNDC3BQ53EP0 1204 aaKnown RBP12.65□□□□□ -0.38
HDAC7-228ENST00000548938 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
HDAC7-228ENST00000548938 OR6V1Q8N148 313 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 STPG2Q8N412 459 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 THEM6Q8WUY1 208 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 OR8D1Q8WZ84 308 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 NOTCH4Q99466 2003 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 SDF2Q99470 211 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 NOX4Q9NPH5 578 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 FBXO34Q9NWN3 711 aa12.65□□□□□ -0.38
HDAC7-228ENST00000548938 CEP290O15078 2479 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ACOD1A6NK06 481 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 A8MXK9 166 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 PIN1P1O15428 100 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ARPC5O15511 151 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 ECDO95905 644 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-228ENST00000548938 SIRPAP78324 504 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 BTN3A2P78410 334 aa12.64□□□□□ -0.39
HDAC7-228ENST00000548938 DUSP8Q13202 625 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms