RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TMEM43Q9BTV4 400 aa18.95■□□□□ 0.62
CACNB3-210ENST00000548874 FNDC11Q9BVV2 318 aa18.95■□□□□ 0.62
CACNB3-210ENST00000548874 CHID1Q9BWS9 393 aa18.95■□□□□ 0.62
CACNB3-210ENST00000548874 POTEKPQ9BYX7 375 aa18.95■□□□□ 0.62
CACNB3-210ENST00000548874 NMNAT1Q9HAN9 279 aaPredicted RBP18.95■□□□□ 0.62
CACNB3-210ENST00000548874 RHCGQ9UBD6 479 aa18.95■□□□□ 0.62
CACNB3-210ENST00000548874 AURKCQ9UQB9 309 aa18.95■□□□□ 0.62
CACNB3-210ENST00000548874 POLEQ07864 2286 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 AHRRA9YTQ3 701 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 H0Y3Z8 333 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 EIF1AYO14602 144 aaKnown RBP18.94■□□□□ 0.62
CACNB3-210ENST00000548874 PRRG2O14669 202 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 WDR1O75083 606 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 MT-ND1P03886 318 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 TFPIP10646 304 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 SLC7A1P30825 629 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 C5orf46Q6UWT4 87 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 ADGRE4PQ86SQ3 457 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 ATCAYQ86WG3 371 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 DOLPP1Q86YN1 238 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 OR10D3Q8NH80 312 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 RNF217Q8TC41 542 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 RSRC1Q96IZ7 334 aaKnown RBP18.94■□□□□ 0.62
CACNB3-210ENST00000548874 OR5B2Q96R09 309 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 TUBA1CQ9BQE3 449 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 ANKRD19PQ9H560 264 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 DENND2DQ9H6A0 471 aaPredicted RBP18.94■□□□□ 0.62
CACNB3-210ENST00000548874 HDGFL3Q9Y3E1 203 aa18.94■□□□□ 0.62
CACNB3-210ENST00000548874 A0A1W2PNR3 127 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 A0A1W2PRQ8 180 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 FIGNL2A6NMB9 653 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 TNFSF11O14788 317 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 H1F0P07305 194 aaKnown RBP18.93■□□□□ 0.62
CACNB3-210ENST00000548874 STSP08842 583 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 GABRA1P14867 456 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 PTGER4P35408 488 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 RBM34P42696 430 aaKnown RBP18.93■□□□□ 0.62
CACNB3-210ENST00000548874 RPS3AP61247 264 aaKnown RBP18.93■□□□□ 0.62
CACNB3-210ENST00000548874 MYBPHQ13203 477 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 DGCR6Q14129 220 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 TRAM2Q15035 370 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 C1orf140Q5VVS0 124 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 C1QL3Q5VWW1 255 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 HBMQ6B0K9 141 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 TMPPEQ6ZT21 453 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 RELTQ969Z4 430 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 PTDSS2Q9BVG9 487 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 TP63Q9H3D4 680 aaPredicted RBP18.93■□□□□ 0.62
CACNB3-210ENST00000548874 ZNF462Q96JM2 2506 aa18.93■□□□□ 0.62
CACNB3-210ENST00000548874 ANKRD65E5RJM6 399 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 FZD7O75084 574 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 FKBP6O75344 327 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 PMS2P2O95744 297 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 HOXD4P09016 255 aaPredicted RBP18.92■□□□□ 0.62
CACNB3-210ENST00000548874 IMPDH2P12268 514 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 GNLYP22749 145 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 CA7P43166 264 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 UQCRFS1P47985 274 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 ACSF3Q4G176 576 aaPredicted RBP18.92■□□□□ 0.62
CACNB3-210ENST00000548874 PDSS1Q5T2R2 415 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 RTL6Q6ICC9 239 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 ZNF585AQ6P3V2 769 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 TMEM255BQ8WV15 326 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 ZNF845Q96IR2 970 aaPredicted RBP18.92■□□□□ 0.62
CACNB3-210ENST00000548874 HS6ST2Q96MM7 605 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 UCN2Q96RP3 112 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 FUZQ9BT04 418 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 SLC19A3Q9BZV2 496 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 PAQR5Q9NXK6 330 aaPredicted RBP18.92■□□□□ 0.62
CACNB3-210ENST00000548874 TINAGQ9UJW2 476 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 OSGIN2Q9Y236 505 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 TRAPPC4Q9Y296 219 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 TESMINQ9Y4I5 508 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 FAM215AQ9Y5M1 114 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 NBASA2RRP1 2371 aa18.92■□□□□ 0.62
CACNB3-210ENST00000548874 CLCA1A8K7I4 914 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 CXCL13O43927 109 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 ACVR2AP27037 513 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 IDUAP35475 653 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 EIF1AXP47813 144 aaKnown RBP18.91■□□□□ 0.62
CACNB3-210ENST00000548874 DIO1P49895 249 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 UGT2B15P54855 530 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 CARD18P57730 90 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 RAC3P60763 192 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 SF3B4Q15427 424 aaKnown RBP eCLIP18.91■□□□□ 0.62
CACNB3-210ENST00000548874 TTC33Q6PID6 262 aaPredicted RBP18.91■□□□□ 0.62
CACNB3-210ENST00000548874 P3H2Q8IVL5 708 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 OR6S1Q8NH40 331 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 SLC7A13Q8TCU3 470 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 TMEM239Q8WW34 195 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 OSTF1Q92882 214 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 KTI12Q96EK9 354 aaPredicted RBP18.91■□□□□ 0.62
CACNB3-210ENST00000548874 SRXN1Q9BYN0 137 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 ARMC1Q9NVT9 282 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 ALKBH4Q9NXW9 302 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 CLCF1Q9UBD9 225 aa18.91■□□□□ 0.62
CACNB3-210ENST00000548874 TRAV36DV7A0A075B6V5 113 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 LIPT2A6NK58 231 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 FTCDNL1E5RQL4 147 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 SULT2B1O00204 365 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms