RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PDZD9Q8IXQ8 264 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 HMGB4Q8WW32 186 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 S100A16Q96FQ6 103 aaKnown RBP21.33■■□□□ 1.01
NPAS3-206ENST00000548645 SIPA1Q96FS4 1042 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 COX14Q96I36 57 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 IFITM5A6NNB3 132 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 PPP1R3DO95685 299 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 IFNGP01579 166 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 GKN3PP0CG01 181 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 MECP2P51608 486 aaKnown RBP21.33■■□□□ 1
NPAS3-206ENST00000548645 DLX5P56178 289 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 GK2Q14410 553 aaPredicted RBP21.33■■□□□ 1
NPAS3-206ENST00000548645 KRT33BQ14525 404 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 OR51A7Q8NH64 312 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 ARL6Q9H0F7 186 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 C6orf106Q9H6K1 298 aaPredicted RBP21.33■■□□□ 1
NPAS3-206ENST00000548645 PCDHGA5Q9Y5G8 931 aa21.33■■□□□ 1
NPAS3-206ENST00000548645 TRAV27A0A087WT01 109 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 MAGEB4O15481 346 aaPredicted RBP21.32■■□□□ 1
NPAS3-206ENST00000548645 NDUFB6O95139 128 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 HCCSP53701 268 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 GAS6Q14393 721 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 ZC3H14Q6PJT7 736 aaKnown RBP21.32■■□□□ 1
NPAS3-206ENST00000548645 UNQ9370/PRO34162Q6UXP9 181 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 FCRLAQ7L513 359 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 NRROSQ86YC3 692 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 SERPINA12Q8IW75 414 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 STPG2Q8N412 459 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 EIF4E3Q8N5X7 224 aaKnown RBP21.32■■□□□ 1
NPAS3-206ENST00000548645 OR7G2Q8NG99 324 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 XKR8Q9H6D3 395 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 NTMQ9P121 344 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 WNT6Q9Y6F9 365 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 GOLGA4Q13439 2230 aaKnown RBP21.32■■□□□ 1
NPAS3-206ENST00000548645 CENPVL1A0A0U1RR11 272 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 LYPD3O95274 346 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 OR2T7P0C7T2 308 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 LAMP2P13473 410 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 ADRB3P13945 408 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 EDNRAP25101 427 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 DPP4P27487 766 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 NHLRC1Q6VVB1 395 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 OR2T27Q8NH04 317 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 C1orf216Q8TAB5 229 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 SNX33Q8WV41 574 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 PNPLA2Q96AD5 504 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 SLC6A15Q9H2J7 730 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 MRPS30Q9NP92 439 aaKnown RBP21.32■■□□□ 1
NPAS3-206ENST00000548645 NOX4Q9NPH5 578 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 TCRBV16S1A1N1A0A5B0 115 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 UBE2QL1A1L167 161 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 CCL16O15467 120 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 TMEM127O75204 238 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 PTH2RP49190 550 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 AMZ1Q400G9 498 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 TMEM69Q5SWH9 247 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 GSG1LQ6UXU4 331 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 ERN2Q76MJ5 926 aaKnown RBP21.32■■□□□ 1
NPAS3-206ENST00000548645 WDR89Q96FK6 387 aaPredicted RBP21.32■■□□□ 1
NPAS3-206ENST00000548645 HCFC1R1Q9NWW0 138 aa21.32■■□□□ 1
NPAS3-206ENST00000548645 PTP4A3O75365 173 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 CXCL10P02778 98 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 TSFMP43897 325 aaKnown RBP21.31■■□□□ 1
NPAS3-206ENST00000548645 RAB28P51157 221 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 ILF3Q12906 894 aaKnown RBP eCLIP21.31■■□□□ 1
NPAS3-206ENST00000548645 ZNF454Q8N9F8 522 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 TCEAL4Q96EI5 215 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 SDF2Q99470 211 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 PDCD1LG2Q9BQ51 273 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 FBXO9Q9UK97 447 aaPredicted RBP21.31■■□□□ 1
NPAS3-206ENST00000548645 GPRIN2O60269 458 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 RAB40ALP0C0E4 278 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 LHX8Q68G74 356 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 LRFN4Q6PJG9 635 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 ZNF433Q8N7K0 673 aaPredicted RBP21.31■■□□□ 1
NPAS3-206ENST00000548645 RAB40AQ8WXH6 277 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 COL26A1Q96A83 441 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 ZMYND19Q96E35 227 aaPredicted RBP21.31■■□□□ 1
NPAS3-206ENST00000548645 OPN4Q9UHM6 478 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 FBXL2Q9UKC9 423 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 COPS3Q9UNS2 423 aa21.31■■□□□ 1
NPAS3-206ENST00000548645 SYNDIG1LA6NDD5 238 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 ACOT7O00154 380 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 LILRB3O75022 631 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 HOXB3P14651 431 aaPredicted RBP21.3■■□□□ 1
NPAS3-206ENST00000548645 P2RX1P51575 399 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 STX4Q12846 297 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 TEAD2Q15562 447 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 DUSP5Q16690 384 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 MRPL2Q5T653 305 aaKnown RBP21.3■■□□□ 1
NPAS3-206ENST00000548645 FAAP20Q6NZ36 180 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 ARHGAP11AQ6P4F7 1023 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 ADAMTSL4Q6UY14 1074 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 ARL14Q8N4G2 192 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 TMIEQ8NEW7 156 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 CNN2Q99439 309 aaKnown RBP21.3■■□□□ 1
NPAS3-206ENST00000548645 GNG8Q9UK08 70 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 FOXJ3Q9UPW0 622 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 D6RAR5 112 aa21.3■■□□□ 1
NPAS3-206ENST00000548645 DBIP07108 87 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms