RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 KRTCAP2Q8N6L1 136 aa17.52■□□□□ 0.4
GATC-202ENST00000548171 FBXO17Q96EF6 278 aa17.52■□□□□ 0.4
GATC-202ENST00000548171 SERHL2Q9H4I8 314 aa17.52■□□□□ 0.4
GATC-202ENST00000548171 POLE3Q9NRF9 147 aa17.52■□□□□ 0.4
GATC-202ENST00000548171 GIMAP2Q9UG22 337 aa17.52■□□□□ 0.4
GATC-202ENST00000548171 AGR2O95994 175 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 PGRP06401 933 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 MPGP29372 298 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 OR2B6P58173 313 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 SLC35A1P78382 337 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 SRSF2Q01130 221 aaKnown RBP17.51■□□□□ 0.39
GATC-202ENST00000548171 MST1LQ2TV78 715 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 ATAD3BQ5T9A4 648 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 IL23RQ5VWK5 629 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 AP1ARQ63HQ0 302 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 KLHL24Q6TFL4 600 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 ADGRG3Q86Y34 549 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 ZNF540Q8NDQ6 660 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 MIPOL1Q8TD10 442 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 SLC35G5Q96KT7 338 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 SORCS2Q96PQ0 1159 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 C1orf50Q9BV19 199 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 OR11A1Q9GZK7 315 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 EXOSC3Q9NQT5 275 aaKnown RBP17.51■□□□□ 0.39
GATC-202ENST00000548171 SLC7A10Q9NS82 523 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 PCDHGB4Q9UN71 923 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 FLVCR1Q9Y5Y0 555 aa17.51■□□□□ 0.39
GATC-202ENST00000548171 TGFAP01135 160 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 PAX7P23759 505 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 RYKP34925 604 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 HTR3AP46098 478 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 MAP2K6P52564 334 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 SLC25A3Q00325 362 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 MAPK14Q16539 360 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 C9orf135Q5VTT2 229 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 EMBQ6PCB8 327 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 RFLNBQ8N5W9 214 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 FNDC5Q8NAU1 212 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 C3orf49Q96BT1 292 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 BOD1Q96IK1 185 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 FOXN4Q96NZ1 517 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 NAA11Q9BSU3 229 aaPredicted RBP17.5■□□□□ 0.39
GATC-202ENST00000548171 OBP2BQ9NPH6 170 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 MOKQ9UQ07 419 aa17.5■□□□□ 0.39
GATC-202ENST00000548171 IGHV4-61A0A0C4DH41 118 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 RNF103-CHMP3A0A140T963 221 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 ZNF208O43345 1280 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 SLU7O95391 586 aaKnown RBP17.49■□□□□ 0.39
GATC-202ENST00000548171 ZNF23P17027 643 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 IQCCQ4KMZ1 466 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 TSPO2Q5TGU0 170 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 TYW3Q6IPR3 259 aaKnown RBP17.49■□□□□ 0.39
GATC-202ENST00000548171 C4orf33Q8N1A6 199 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 PMM1Q92871 262 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 TMEM45BQ96B21 275 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 DDIT4LQ96D03 193 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 DNAJA3Q96EY1 480 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 SAP130Q9H0E3 1048 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 OR51I1Q9H343 314 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 FBXO9Q9UK97 447 aaPredicted RBP17.49■□□□□ 0.39
GATC-202ENST00000548171 WDR45Q9Y484 360 aa17.49■□□□□ 0.39
GATC-202ENST00000548171 PDE5AO76074 875 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 SERPINF1P36955 418 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 KCNJ10P78508 379 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 MAD2L1Q13257 205 aaPredicted RBP17.48■□□□□ 0.39
GATC-202ENST00000548171 SLC17A1Q14916 467 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 CARTPTQ16568 116 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 PGS1Q32NB8 556 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 OLIG3Q7RTU3 272 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 SLC46A3Q7Z3Q1 461 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 ABHD12BQ7Z5M8 362 aaPredicted RBP17.48■□□□□ 0.39
GATC-202ENST00000548171 ARFGAP2Q8N6H7 521 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 POMGNT2Q8NAT1 580 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 AGR3Q8TD06 166 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 C3orf30Q96M34 536 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 VRK1Q99986 396 aaPredicted RBP17.48■□□□□ 0.39
GATC-202ENST00000548171 KCNS3Q9BQ31 491 aa17.48■□□□□ 0.39
GATC-202ENST00000548171 B9A039 149 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 RNASET2O00584 256 aaKnown RBP17.47■□□□□ 0.39
GATC-202ENST00000548171 BCAS1O75363 584 aaPredicted RBP17.47■□□□□ 0.39
GATC-202ENST00000548171 SHBGP04278 402 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 ALDH3A1P30838 453 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 SERPINB5P36952 375 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 IDH2P48735 452 aaKnown RBP17.47■□□□□ 0.39
GATC-202ENST00000548171 CLDN8P56748 225 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 CR1LQ2VPA4 569 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 PAQR6Q6TCH4 344 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 CLECL1Q8IZS7 167 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 TUBGCP3Q96CW5 907 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 KATNB1Q9BVA0 655 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 PIF1Q9H611 641 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 CA10Q9NS85 328 aa17.47■□□□□ 0.39
GATC-202ENST00000548171 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.47■□□□□ 0.39
GATC-202ENST00000548171 TMED7-TICAM2A0A0A6YYA0 188 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 SMIM23A6NLE4 172 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 TCF21O43680 179 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 CRYAAP02489 173 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 G6PDP11413 515 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 CCNA2P20248 432 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 POLR2HP52434 150 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms