RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TUSC5Q8IXB3 177 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 SMYD1Q8NB12 490 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 BHLHE22Q8NFJ8 381 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 C3orf49Q96BT1 292 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 DDIT4LQ96D03 193 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 ZNF559Q9BR84 538 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 MYLK2Q9H1R3 596 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 CRIM1Q9NZV1 1036 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 FBN2P35556 2912 aa16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 ANKHD1Q8IWZ3 2542 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-206ENST00000547764 TUBAL3A6NHL2 446 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 CYTIPO60759 359 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 OPN1SWP03999 348 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 FAM27E3Q08E93 113 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 TMEM201Q5SNT2 666 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 LINC01560Q8TB33 94 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 GP6Q9HCN6 339 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 TMEM181Q9P2C4 612 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 KLHL13Q9P2N7 655 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 ING1Q9UK53 422 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 TRAPPC4Q9Y296 219 aa16.69■□□□□ 0.26
PRPF40B-206ENST00000547764 MPDZO75970 2070 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 APCP25054 2843 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 AIM2O14862 343 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 YES1P07947 543 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 IMPDH2P12268 514 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 HTR2AP28223 471 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 CD79BP40259 229 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 OR2B6P58173 313 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 RASGEF1BQ0VAM2 473 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 BNIP2Q12982 314 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 DUSP7Q16829 419 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 INTS11Q5TA45 600 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 NUFIP2Q7Z417 695 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 PATL1Q86TB9 770 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 ATG4DQ86TL0 474 aaPredicted RBP16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 ZNF583Q96ND8 569 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 PSD2Q9BQI7 771 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 WFDC6Q9BQY6 131 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 PRR14Q9BWN1 585 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 POTEKPQ9BYX7 375 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 C12orf49Q9H741 205 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 BCO1Q9HAY6 547 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 KLHL28Q9NXS3 571 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 ELOVL5Q9NYP7 299 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 KLHL9Q9P2J3 617 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 SLC13A4Q9UKG4 626 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 USP22Q9UPT9 525 aa16.68■□□□□ 0.26
PRPF40B-206ENST00000547764 DNPH1O43598 174 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 KCNJ5P48544 419 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 PCYT1AP49585 367 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 RGS8P57771 180 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 EXOC3L2Q2M3D2 409 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 CCDC80Q76M96 950 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 PIGWQ7Z7B1 504 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 LSMEM1Q8N8F7 131 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 GPR32P1Q8NGA4 272 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 OR52E4Q8NGH9 312 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 FAM222BQ8WU58 562 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 TAMM41Q96BW9 452 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 ZHX1-C8orf76Q96EF9 292 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 GPATCH1Q9BRR8 931 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 TRIM2Q9C040 744 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 MCCC2Q9HCC0 563 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 RPS6KB2Q9UBS0 482 aa16.67■□□□□ 0.26
PRPF40B-206ENST00000547764 A0A1B0GWA3 101 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 CCT8L1PA6NM43 557 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 A8MVM7 634 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 TMEM229AB2RXF0 380 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 TPST2O60704 377 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 LGI1O95970 557 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 POU2F1P14859 743 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 FPR1P21462 350 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 CRYBA2P53672 197 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 KRTAP10-9P60411 292 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 SLC35A1P78382 337 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 H3F3AP84243 136 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 ABLIM2Q6H8Q1 611 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 ERICH5Q6P6B1 374 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 ZNF775Q96BV0 537 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 ZNF300Q96RE9 604 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 TACO1Q9BSH4 297 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 EVA1AQ9H8M9 152 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 EFCAB1Q9HAE3 211 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 CMTM6Q9NX76 183 aa16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 TESQ9UGI8 421 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-206ENST00000547764 ZNF724A8MTY0 619 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 ZNF814B7Z6K7 855 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 RAMP1O60894 148 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 NPIPB7O75200 414 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 C8BP07358 591 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 EPXP11678 715 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 CD247P20963 164 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 IDUAP35475 653 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 UGT2B10P36537 528 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 NCALDP61601 193 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 CEACAM7Q14002 265 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 VEZF1Q14119 521 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 PDK3Q15120 406 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms