RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PIP5KL1Q5T9C9 394 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 BCL2L15Q5TBC7 163 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 PLBD1Q6P4A8 553 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SEZ6L2Q6UXD5 910 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 LRRN1Q6UXK5 716 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SLC39A5Q6ZMH5 540 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 RFPL4BQ6ZWI9 263 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 NUP54Q7Z3B4 507 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 DEFB128Q7Z7B8 93 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 VRK2Q86Y07 508 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 NKAIN4Q8IVV8 208 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 NAXDQ8IW45 347 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 ZNF440Q8IYI8 595 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 GPR135Q8IZ08 494 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SIRT6Q8N6T7 355 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 MRPL43Q8N983 215 aaKnown RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 LINC01555Q8NAE3 123 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 LSM14AQ8ND56 463 aaKnown RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 OR2L3Q8NG85 312 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 OR10H4Q8NGA5 316 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 CD99L2Q8TCZ2 262 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 AUTS2Q8WXX7 1259 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SORCS1Q8WY21 1168 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SUSD6Q92537 303 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 HOXB13Q92826 284 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 PGLYRP3Q96LB9 341 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SAMD8Q96LT4 415 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 C10orf90Q96M02 699 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 C12orf66Q96MD2 445 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 GFM1Q96RP9 751 aaKnown RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 PRSS27Q9BQR3 290 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 LGR4Q9BXB1 951 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 BEX2Q9BXY8 128 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SLC19A3Q9BZV2 496 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 ZNF436Q9C0F3 470 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 TWSG1Q9GZX9 223 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 MRPL18Q9H0U6 180 aaKnown RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 RSPH9Q9H1X1 276 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 PPA2Q9H2U2 334 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 LINC00597Q9H2U6 94 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 HEXA-AS1Q9H8Q6 139 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 CD93Q9NPY3 652 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 DLL4Q9NR61 685 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 CTPS2Q9NRF8 586 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 CGGBP1Q9UFW8 167 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 IL20RAQ9UHF4 553 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SLC23A1Q9UHI7 598 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 ST6GALNAC2Q9UJ37 374 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 ABT1Q9ULW3 272 aaKnown RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SLC7A7Q9UM01 511 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SIGLEC7Q9Y286 467 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 ATG4BQ9Y4P1 393 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 SPEF1Q9Y4P9 236 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 DENND4CQ5VZ89 1909 aa5.97□□□□□ -1.45
SNHG1-225ENST00000545920 NUP214P35658 2090 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-225ENST00000545920 IGKV1-8A0A0C4DH67 115 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 C2orf92A0A1B0GVN3 265 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 FEZF1A0PJY2 475 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 GXYLT2A0PJZ3 443 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 TRABD2BA6NFA1 517 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 ZSCAN5BA6NJL1 495 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 HMSDA8MTL9 139 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 M0R233 179 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 ACOT7O00154 380 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 AIPO00170 330 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 SOCS6O14544 535 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 IMPA2O14732 288 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 ARPC3O15145 178 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 AKR7A2O43488 359 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 TNFSF14O43557 240 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 SSNA1O43805 119 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 B3GALT2O43825 422 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 LCMT2O60294 686 aaKnown RBP5.96□□□□□ -1.46
SNHG1-225ENST00000545920 B3GALNT1O75752 331 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 KRT33AO76009 404 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 OR7A10O76100 309 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 OR2A4O95047 310 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 LYPD3O95274 346 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 WDPCPO95876 746 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 EGFP01133 1207 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 ATP1B1P05026 303 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 TACSTD2P09758 323 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 ZGLP1P0C6A0 271 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 SLC35G6P0C7Q6 338 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 SMIM10L1P0DMW3 83 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 IFI30P13284 250 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 GJA1P17302 382 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 PSMB1P20618 241 aaKnown RBP5.96□□□□□ -1.46
SNHG1-225ENST00000545920 C5AR1P21730 350 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 SHC1P29353 583 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 MAT2AP31153 395 aaKnown RBP5.96□□□□□ -1.46
SNHG1-225ENST00000545920 UQCRC1P31930 480 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 CD96P40200 585 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 P2RY2P41231 377 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 GPR4P46093 362 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 DGKEP52429 567 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 PDX1P52945 283 aa5.96□□□□□ -1.46
SNHG1-225ENST00000545920 CAV3P56539 151 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms