RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SLC25A53Q5H9E4 307 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CD276Q5ZPR3 534 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 TYW3Q6IPR3 259 aaKnown RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 TNFAIP8L2Q6P589 184 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 MSANTD1Q6ZTZ1 278 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 MAVSQ7Z434 540 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF619Q8N2I2 560 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 TMCO5AQ8N6Q1 288 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 OR6K3Q8NGY3 331 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 OR5W2Q8NH69 310 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 GPR119Q8TDV5 335 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 RNF128Q8TEB7 428 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ZFP90Q8TF47 636 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ST8SIA1Q92185 356 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CPNE4Q96A23 557 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ROPN1LQ96C74 230 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 C7orf26Q96N11 449 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 OR52E6Q96RD3 313 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 PANX1Q96RD7 426 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ZBTB18Q99592 522 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 KLHDC3Q9BQ90 382 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 WDR55Q9H6Y2 383 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 TMEM185BQ9H7F4 350 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 SDR39U1Q9NRG7 319 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ZIM2Q9NZV7 527 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 KCNE5Q9UJ90 142 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 EDARQ9UNE0 448 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 PROCRQ9UNN8 238 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 LIPT1Q9Y234 373 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 SLC35A3Q9Y2D2 325 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 CARD8Q9Y2G2 431 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 WDR45Q9Y484 360 aa6.86□□□□□ -1.31
SNHG1-223ENST00000545440 ROS1P08922 2347 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 A0A0J9YW62 118 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CENPVL1A0A0U1RR11 272 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CCDC154A6NI56 674 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 GTPBP1O00178 669 aaKnown RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 HMGN4O00479 90 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF195O14628 629 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CXCL13O43927 109 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 FCMRO60667 390 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 PLGP00747 810 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CSTAP01040 98 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 IL6P05231 212 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 OR12D1P0DN82 309 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 KITP10721 976 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 POU2F1P14859 743 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CD1EP15812 388 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 IL11P20809 199 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 SHC1P29353 583 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 IL12AP29459 219 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 AGTR1P30556 359 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 SFTPDP35247 375 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 UGT2B10P36537 528 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 PGM1P36871 562 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 SLC6A8P48029 635 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CTBP2P56545 445 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 NME5P56597 212 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 QPRTQ15274 297 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 RNPS1Q15287 305 aaKnown RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 NDUFAF6Q330K2 333 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 HBMQ6B0K9 141 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 PPP4R4Q6NUP7 873 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 C3orf33Q6P1S2 294 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF474Q6S9Z5 364 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 PAMR1Q6UXH9 720 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 FRRS1Q6ZNA5 592 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 EIF3MQ7L2H7 374 aaKnown RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ZBTB46Q86UZ6 589 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 RNF130Q86XS8 419 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CDC20BQ86Y33 519 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 LINC01560Q8TB33 94 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 XAGE5Q8WWM1 108 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 TMEM234Q8WY98 164 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 NRGNQ92686 78 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 RAB8BQ92930 207 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ARL8AQ96BM9 186 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ATP6V1G3Q96LB4 118 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 TRNT1Q96Q11 434 aaKnown RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 FOXC2Q99958 501 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 SLC39A3Q9BRY0 314 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 PRRG4Q9BZD6 226 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 LAT2Q9GZY6 243 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 OPN3Q9H1Y3 402 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 COQ10BQ9H8M1 238 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 TIGARQ9NQ88 270 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 EXOSC3Q9NQT5 275 aaKnown RBP6.85□□□□□ -1.31
SNHG1-223ENST00000545440 DLL4Q9NR61 685 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 NDRG3Q9UGV2 375 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ST6GALNAC2Q9UJ37 374 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ITGB1BP2Q9UKP3 347 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 MKLN1Q9UL63 735 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 HIVEP1P15822 2718 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 PLCE1Q9P212 2302 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 ITPR3Q14573 2671 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 CADP27708 2225 aa6.85□□□□□ -1.31
SNHG1-223ENST00000545440 C2CD3Q4AC94 2353 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 UQCRHLA0A096LP55 91 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 C9JVG2 144 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms