RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 RGS19P49795 217 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CTXN1P60606 82 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 BLOC1S1P78537 153 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 GRM7Q14831 915 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 KLHL26Q53HC5 615 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 WBP2NLQ6ICG8 309 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CREB3L2Q70SY1 520 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 WDSUB1Q8N9V3 476 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 OR5M3Q8NGP4 307 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 OR9A4Q8NGU2 314 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 FBLIM1Q8WUP2 373 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 KCTD12Q96CX2 325 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 COX14Q96I36 57 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MED18Q9BUE0 208 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 B3GNT4Q9C0J1 378 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 PLEKHA1Q9HB21 404 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 FGF20Q9NP95 211 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 FANCFQ9NPI8 374 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 NTNG1Q9Y2I2 539 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 A0A087WUU8 490 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CDHR4A6H8M9 788 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SCO2O43819 266 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CEACAM5P06731 702 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 PTPN6P29350 595 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MAN2A2P49641 1150 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 HMGA2P52926 109 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 DUSP8Q13202 625 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 DUSP5Q16690 384 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SCGB2B2Q4G0G5 96 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 GLT8D1Q68CQ7 371 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 RPL22L1Q6P5R6 122 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 IL20RBQ6UXL0 311 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZER1Q7Z7L7 766 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TMPRSS12Q86WS5 348 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF595Q8IYB9 648 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 OR13C3Q8NGS6 347 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 OR2T4Q8NH00 348 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MFSD8Q8NHS3 518 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 DAZLQ92904 295 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 LMF2Q9BU23 707 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 NIPAL2Q9H841 368 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SIDT1Q9NXL6 827 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 TBC1D29Q9UFV1 150 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ANKRD34BA5PLL1 514 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 KDM4EB2RXH2 506 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 POLR1CO15160 346 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 NARSO43776 548 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 DNAJB6O75190 326 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MAS1P04201 325 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ERVK-25P63136 954 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ASAH1Q13510 395 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CDK10Q15131 360 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 FAM69AQ5T7M9 428 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 AADACL4Q5VUY2 407 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SLC18B1Q6NT16 456 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF620Q6ZNG0 422 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 ZNF547Q8IVP9 402 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 BEST3Q8N1M1 668 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SVBPQ8N300 66 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 GTPBP8Q8N3Z3 284 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 ACBD4Q8NC06 268 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SLC16A11Q8NCK7 471 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 OR2A1Q8NGT9 310 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TERB2Q8NHR7 220 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 BRIX1Q8TDN6 353 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 TMEM234Q8WY98 164 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 CNOT9Q92600 299 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 GIMAP5Q96F15 307 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 TOE1Q96GM8 510 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 TCTN2Q96GX1 697 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MRI1Q9BV20 369 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 SEMA6CQ9H3T2 930 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 FGF22Q9HCT0 170 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 MRPL15Q9P015 296 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 ABRACLQ9P1F3 81 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 C19orf53Q9UNZ5 99 aaPredicted RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 C14orf166Q9Y224 244 aaKnown RBP5.37□□□□□ -1.55
VPS50-220ENST00000544910 HS3ST3A1Q9Y663 406 aa5.37□□□□□ -1.55
VPS50-220ENST00000544910 THSD7BQ9C0I4 1608 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 RAB19A4D1S5 217 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 PRAMEF4O60810 478 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SLC35E2P0CK97 266 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 VAMP1P23763 118 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 PSMB10P40306 273 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 CLRN1P58418 232 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 PRAMEF9Q5VWM5 478 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SLC6A19Q695T7 634 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 C3P1Q6ZMU1 363 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 TTLL10Q6ZVT0 673 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 MAMDC2Q7Z304 686 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 KIAA0907Q7Z7F0 614 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 GPR32P1Q8NGA4 272 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 OR51L1Q8NGJ5 315 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 OR2T35Q8NGX2 323 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 OR1E3Q8WZA6 343 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 TM9SF4Q92544 642 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 NECAB3Q96P71 396 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 BEX1Q9HBH7 125 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 RANGRFQ9HD47 186 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 EPHA6Q9UF33 1036 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms