RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ATP6V1E1P36543 226 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 ENTPD1P49961 510 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 INSL4Q14641 139 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 COL28A1Q2UY09 1125 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 PRAMEF20Q5VT98 475 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 WBP2NLQ6ICG8 309 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 KDM8Q8N371 416 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 SLC37A3Q8NCC5 494 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 TM9SF4Q92544 642 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 SGTBQ96EQ0 304 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 TSSK2Q96PF2 358 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 CMKLR1Q99788 373 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 KRCC1Q9NPI7 259 aaPredicted RBP12.46□□□□□ -0.42
HCFC2-202ENST00000544223 CNOT2Q9NZN8 540 aaKnown RBP12.46□□□□□ -0.42
HCFC2-202ENST00000544223 FOXJ2Q9P0K8 574 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 OSGIN1Q9UJX0 560 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 LSM2Q9Y333 95 aaKnown RBP12.46□□□□□ -0.42
HCFC2-202ENST00000544223 PMF1-BGLAPU3KQ54 211 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 CEP250Q9BV73 2442 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 ATMQ13315 3056 aa12.46□□□□□ -0.42
HCFC2-202ENST00000544223 DSPP15924 2871 aaKnown RBP12.45□□□□□ -0.42
HCFC2-202ENST00000544223 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-202ENST00000544223 FLRT2O43155 660 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 AIREO43918 545 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 GABARAPO95166 117 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 IL11P20809 199 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 TGM4P49221 684 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 RAB11FIP2Q7L804 512 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 CMIPQ8IY22 773 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 TP53INP1Q96A56 240 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 ISG20L2Q9H9L3 353 aaKnown RBP12.45□□□□□ -0.42
HCFC2-202ENST00000544223 HS3ST3B1Q9Y662 390 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 KDM4EB2RXH2 506 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-202ENST00000544223 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 BCL10O95999 233 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 PLGP00747 810 aaPredicted RBP12.45□□□□□ -0.42
HCFC2-202ENST00000544223 NCF4Q15080 339 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 PCOLCEQ15113 449 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 LNX2Q8N448 690 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 TMEM99Q8N816 258 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 TOR1AIP2Q8NFQ8 470 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 HSPBAP1Q96EW2 488 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 FOXN4Q96NZ1 517 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
HCFC2-202ENST00000544223 HOXD1Q9GZZ0 328 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 MARCH7Q9H992 704 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 ZNF160Q9HCG1 818 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 MYOTQ9UBF9 498 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 MRTO4Q9UKD2 239 aaKnown RBP12.45□□□□□ -0.42
HCFC2-202ENST00000544223 ERGIC3Q9Y282 383 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 GVINP1Q7Z2Y8 2422 aa12.45□□□□□ -0.42
HCFC2-202ENST00000544223 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 C11orf98E9PRG8 122 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 TO15178 435 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 PPM1BO75688 479 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 NADKO95544 446 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 LIMS3P0CW19 117 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 LIMS4P0CW20 117 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 OTX2P32243 289 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 SLC1A3P43003 542 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 PNLIPRP2P54317 469 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 NRG3P56975 720 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 DCAF7P61962 342 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 C19orf57Q0VDD7 668 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 QPRTQ15274 297 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 SPHARQ15513 63 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 ANKDD1AQ495B1 522 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 C3orf38Q5JPI3 329 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 TMEM205Q6UW68 189 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 SNX29P2Q8IUI4 249 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 FAM98AQ8NCA5 519 aaKnown RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 TBC1D15Q8TC07 691 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 GPR119Q8TDV5 335 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 DNAJA4Q8WW22 397 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 VMP1Q96GC9 406 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 SECISBP2Q96T21 854 aaKnown RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 KATNB1Q9BVA0 655 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 TMEM185BQ9H7F4 350 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 GPN2Q9H9Y4 310 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 TOR4AQ9NXH8 423 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 MRPS18BQ9Y676 258 aaKnown RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 DVL2O14641 736 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 HCN1O60741 890 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 CBFA2T3O75081 653 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 RCBTB2O95199 551 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 RAB36O95755 333 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 TCN2P20062 427 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 CLK1P49759 484 aaKnown RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 TEKQ02763 1124 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 ITGADQ13349 1161 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 IL20RBQ6UXL0 311 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 BTLAQ7Z6A9 289 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 NANOGP1Q8N7R0 232 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 KISS1RQ969F8 398 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 ZMYND19Q96E35 227 aaPredicted RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 DEFB126Q9BYW3 111 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms