RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 DPP10Q8N608 796 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 MBD6Q96DN6 1003 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 ARL5BQ96KC2 179 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 POTEKPQ9BYX7 375 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 ACTR6Q9GZN1 396 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 ING1Q9UK53 422 aaPredicted RBP20.67■□□□□ 0.9
CHFR-222ENST00000544093 FREM1Q5H8C1 2179 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 F8P00451 2351 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 DEFB108AA8MXU0 73 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 GKN3PP0CG01 181 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 CCNA2P20248 432 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 SLC6A2P23975 617 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 PRKAR1BP31321 381 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 KEAP1Q14145 624 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 Q6ZT83 130 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 CLIP4Q8N3C7 705 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 BHLHE22Q8NFJ8 381 aaPredicted RBP20.66■□□□□ 0.9
CHFR-222ENST00000544093 ALPK1Q96QP1 1244 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 NAA11Q9BSU3 229 aaPredicted RBP20.66■□□□□ 0.9
CHFR-222ENST00000544093 OR11A1Q9GZK7 315 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 LIME1Q9H400 295 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 MED4Q9NPJ6 270 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 CCM2LQ9NUG4 571 aaPredicted RBP20.66■□□□□ 0.9
CHFR-222ENST00000544093 ZNF446Q9NWS9 450 aa20.66■□□□□ 0.9
CHFR-222ENST00000544093 C6orf203Q9P0P8 240 aaPredicted RBP20.66■□□□□ 0.9
CHFR-222ENST00000544093 TMEM72A0PK05 275 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 GCM2O75603 506 aaPredicted RBP20.65■□□□□ 0.9
CHFR-222ENST00000544093 SLC16A1P53985 500 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 NR1H2P55055 460 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 OR2B6P58173 313 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 H3F3AP84243 136 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 BEX5Q5H9J7 111 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 SFRP5Q5T4F7 317 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 ANKRD34AQ69YU3 496 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 DLEU7Q6UYE1 221 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 SSX8Q7RTT4 187 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 DHDDSQ86SQ9 333 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 CXorf67Q86X51 503 aaPredicted RBP20.65■□□□□ 0.9
CHFR-222ENST00000544093 CADM2Q8N3J6 435 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 NFKBIDQ8NI38 313 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 PIK3IP1Q96FE7 263 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 ZC3HAV1LQ96H79 300 aaKnown RBP20.65■□□□□ 0.9
CHFR-222ENST00000544093 ZNF607Q96SK3 696 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 CXXC4Q9H2H0 198 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 PLEKHA6Q9Y2H5 1048 aa20.65■□□□□ 0.9
CHFR-222ENST00000544093 HIVEP1P15822 2718 aa20.64■□□□□ 0.9
CHFR-222ENST00000544093 PRORSD1PA6NEY8 169 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 SERPINB7O75635 380 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 IL32P24001 234 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 ITGADQ13349 1161 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 RUNDC3AQ59EK9 446 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 ZNF100Q8IYN0 542 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 KISS1RQ969F8 398 aaPredicted RBP20.64■□□□□ 0.89
CHFR-222ENST00000544093 ZNF300Q96RE9 604 aaPredicted RBP20.64■□□□□ 0.89
CHFR-222ENST00000544093 CPPED1Q9BRF8 314 aaPredicted RBP20.64■□□□□ 0.89
CHFR-222ENST00000544093 EVA1AQ9H8M9 152 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 CHST2Q9Y4C5 530 aa20.64■□□□□ 0.89
CHFR-222ENST00000544093 MAP1AP78559 2803 aaPredicted RBP20.63■□□□□ 0.89
CHFR-222ENST00000544093 ZNF716A6NP11 495 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 A8MVM7 634 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 GPIP06744 558 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 IDUAP35475 653 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 SCARB2Q14108 478 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 PAQR6Q6TCH4 344 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 SERPINA11Q86U17 422 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 HSD17B8Q92506 261 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 ANKRD27Q96NW4 1050 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 TMEM120AQ9BXJ8 343 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 NGBQ9NPG2 151 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 ANGPT4Q9Y264 503 aa20.63■□□□□ 0.89
CHFR-222ENST00000544093 NOSIPQ9Y314 301 aaKnown RBP20.63■□□□□ 0.89
CHFR-222ENST00000544093 ITPR3Q14573 2671 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 ZNF814B7Z6K7 855 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 SIAH2O43255 324 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 ATE1O95260 518 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 ADAP00813 363 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 THBDP07204 575 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 RBBP4Q09028 425 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 DHRS4L2Q6PKH6 230 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 C11orf65Q8NCR3 313 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 HIPK4Q8NE63 616 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 APH1AQ96BI3 265 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 S100PBPQ96BU1 408 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 CGREF1Q99674 301 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 TAPBPLQ9BX59 468 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 IKZF5Q9H5V7 419 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 C12orf10Q9HB07 376 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 FGFR1OP2Q9NVK5 253 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 PARPBPQ9NWS1 579 aa20.62■□□□□ 0.89
CHFR-222ENST00000544093 TEP1Q99973 2627 aaKnown RBP20.61■□□□□ 0.89
CHFR-222ENST00000544093 VIMP08670 466 aaKnown RBP20.61■□□□□ 0.89
CHFR-222ENST00000544093 IMPDH2P12268 514 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 PRG2P13727 222 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 KLK2P20151 261 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 FPR1P21462 350 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 ARFIP2P53365 341 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 NFYCQ13952 458 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 C22orf34Q6ZV56 151 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 SLC30A8Q8IWU4 369 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 C3orf49Q96BT1 292 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms