RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CELSR3Q9NYQ7 3312 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 OR5H15A6NDH6 313 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 WIPF3A6NGB9 483 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM200CA6NKL6 621 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 CAPN14A8MX76 684 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 NR5A2O00482 541 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 ERN1O75460 977 aaKnown RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 PRB1P04280 392 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 DRD4P21917 467 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 DRD5P21918 477 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 APEX1P27695 318 aaKnown RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 CYB561P49447 251 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 EMDP50402 254 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 NR0B1P51843 470 aaKnown RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 HBA1P69905 142 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 DUSP8Q13202 625 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 TUBA3CQ13748 450 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 TIGD2Q4W5G0 525 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 TUBA3EQ6PEY2 450 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 OPN5Q6U736 354 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 PCSK4Q6UW60 755 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 IGFL2Q6UWQ7 119 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 C16orf47Q6ZP98 133 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 GPALPP1Q8IXQ4 340 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 CLECL1Q8IZS7 167 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 CPSF7Q8N684 471 aaKnown RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 TRIML2Q8N7C3 387 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 C17orf47Q8NEP4 570 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 OR56A1Q8NGH5 318 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 BCAS4Q8TDM0 211 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 C10orf82Q8WW14 230 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 HAS2Q92819 552 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 ADIPOR1Q96A54 375 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 MOAP1Q96BY2 351 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 LCORQ96JN0 433 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 MS4A4EQ96PG1 132 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 PANX1Q96RD7 426 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 RASL10BQ96S79 203 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 NPAS2Q99743 824 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 CXorf36Q9H7Y0 433 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 FOLH1BQ9HBA9 442 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 ZBTB20Q9HC78 741 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 EQTNQ9NQ60 294 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 ZCCHC3Q9NUD5 404 aaKnown RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 ANKRD10Q9NXR5 420 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 CRNNQ9UBG3 495 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 BTNL2Q9UIR0 455 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 ADAM21Q9UKJ8 722 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 ERVK-11Q9UQG0 969 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 OR10H1Q9Y4A9 318 aa4.66□□□□□ -1.66
CLIP1-217ENST00000543205 HEMK1Q9Y5R4 338 aaPredicted RBP4.66□□□□□ -1.66
CLIP1-217ENST00000543205 FRG2CA6NGY1 282 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 AQP7P3A6NL99 342 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 L7N2F9 121 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 RFXANKO14593 260 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 ACOX3O15254 700 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 CCDC22O60826 627 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 SCN2BO60939 215 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 OR6B1O95007 311 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 ANP32DO95626 131 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 STAMBPO95630 424 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 PLGP00747 810 aaPredicted RBP4.65□□□□□ -1.66
CLIP1-217ENST00000543205 NPPAP01160 153 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 UQCRC2P22695 453 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 CHI3L1P36222 383 aaPredicted RBP4.65□□□□□ -1.66
CLIP1-217ENST00000543205 CPOXP36551 454 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 SOX3P41225 446 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 PPICP45877 212 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 KHKP50053 298 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 HLCSP50747 726 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 PSPHP78330 225 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 KLRB1Q12918 225 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 TP53BP2Q13625 1128 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 CBFBQ13951 182 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 OR1C1Q15619 314 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 NNATQ16517 81 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 VPS26BQ4G0F5 336 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 C6orf10Q5SRN2 563 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 SPINK14Q6IE38 97 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 IL20RBQ6UXL0 311 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM64Q6YI46 380 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF621Q6ZSS3 439 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 DND1Q8IYX4 353 aaKnown RBP4.65□□□□□ -1.66
CLIP1-217ENST00000543205 BCL6BQ8N143 479 aaPredicted RBP4.65□□□□□ -1.66
CLIP1-217ENST00000543205 RBMXL3Q8N7X1 1067 aaKnown RBP4.65□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF441Q8N8Z8 693 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 CDRT4Q8N9R6 151 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 CATSPER1Q8NEC5 780 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 OR5AK3PQ8NH89 298 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 PSMA8Q8TAA3 256 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 SFXN5Q8TD22 340 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 GPR151Q8TDV0 419 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 SLC9A6Q92581 669 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM125Q96AQ2 219 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 SPDL1Q96EA4 605 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 ITCHQ96J02 903 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 C5orf34Q96MH7 638 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 VSTM2LQ96N03 204 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 CCDC115Q96NT0 180 aa4.65□□□□□ -1.66
CLIP1-217ENST00000543205 SLC35A5Q9BS91 424 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms