RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 AMER2Q8N7J2 671 aa7.14□□□□□ -1.27
LRP6-206ENST00000543091 RASL10BQ96S79 203 aa7.14□□□□□ -1.27
LRP6-206ENST00000543091 PITX2Q99697 317 aa7.14□□□□□ -1.27
LRP6-206ENST00000543091 EXOSC1Q9Y3B2 195 aaKnown RBP7.14□□□□□ -1.27
LRP6-206ENST00000543091 PCDHGA6Q9Y5G7 932 aa7.14□□□□□ -1.27
LRP6-206ENST00000543091 KIAA1671Q9BY89 1806 aa7.14□□□□□ -1.27
LRP6-206ENST00000543091 PMS2P1A4D2B8 440 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 ANKUB1A6NFN9 424 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 CBX7O95931 251 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 PTHP01270 115 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 HTR1AP08908 422 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 ETV5P41161 510 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 ZFP36L1Q07352 338 aaKnown RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 NDUFA5Q16718 116 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.13□□□□□ -1.27
LRP6-206ENST00000543091 OR9Q2Q8NGE9 314 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 OR5J2Q8NH18 312 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 TRUB1Q8WWH5 349 aaKnown RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 NSMAFQ92636 917 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 OR52D1Q9H346 318 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 GPR27Q9NS67 375 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 KLK4Q9Y5K2 254 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 KIAA0513O60268 411 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 S1PR1P21453 382 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 CNR1P21554 472 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 TGIF1Q15583 401 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 TIGD3Q6B0B8 471 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 H1FNTQ75WM6 255 aaPredicted RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 CHERPQ8IWX8 916 aaKnown RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 SUMF1Q8NBK3 374 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 OR10G3Q8NGC4 313 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 OR51G2Q8NGK0 314 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 NEK7Q8TDX7 302 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 GATA6Q92908 595 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 CRELD1Q96HD1 420 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 CNN2Q99439 309 aaKnown RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 ACER3Q9NUN7 267 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 HDGFL3Q9Y3E1 203 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 ALG1L2C9J202 215 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 MAP3K8P41279 467 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 PEAR1Q5VY43 1037 aaPredicted RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 OR2A2Q6IF42 318 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 SLC18B1Q6NT16 456 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 OLIG3Q7RTU3 272 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 GDF7Q7Z4P5 450 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 SATL1Q86VE3 508 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 ZNF566Q969W8 418 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 SLC19A3Q9BZV2 496 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 WDR12Q9GZL7 423 aaKnown RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 TSPAN10Q9H1Z9 355 aaPredicted RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 CALHM2Q9HA72 323 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 TMEM184BQ9Y519 407 aaPredicted RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 HSPE1-MOB4S4R3N1 261 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 NKX2-8O15522 239 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 PRKNO60260 465 aaPredicted RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 RPP14O95059 124 aaKnown RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 CD79AP11912 226 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 LIFP15018 202 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 EDNRAP25101 427 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 GRPRP30550 384 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 APLNRP35414 380 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 MLLT10P55197 1068 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 CLDN17P56750 224 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 ERVK-25P63136 954 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 MVKQ03426 396 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 GPR155Q7Z3F1 870 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 ZNF420Q8TAQ5 688 aaPredicted RBP7.13□□□□□ -1.27
LRP6-206ENST00000543091 AP3S1Q92572 193 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 APH1AQ96BI3 265 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 B3GNT4Q9C0J1 378 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 NUAK2Q9H093 628 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 SLC38A1Q9H2H9 487 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 GPR160Q9UJ42 338 aa7.13□□□□□ -1.27
LRP6-206ENST00000543091 SCN3AQ9NY46 2000 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 PNMA8CA0A1B0GUJ8 204 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 ITGB2P05107 769 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 ANXA2P07355 339 aaKnown RBP7.12□□□□□ -1.27
LRP6-206ENST00000543091 GGT2P36268 569 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 RFC3P40938 356 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 NUDT6P53370 316 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 WNT3P56703 355 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 FGFBP1Q14512 234 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 SHBQ15464 509 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 PLA2G2CQ5R387 149 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 NIPAL3Q6P499 406 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 SPATC1Q76KD6 591 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 PRICKLE2Q7Z3G6 844 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 PNLDC1Q8NA58 520 aaKnown RBP7.12□□□□□ -1.27
LRP6-206ENST00000543091 C17orf50Q8WW18 174 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 SPTSSAQ969W0 71 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 LRR1Q96L50 414 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 LMF1Q96S06 567 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 ZNF700Q9H0M5 742 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 TCF7L1Q9HCS4 588 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 GPATCH2Q9NW75 528 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 FOXJ2Q9P0K8 574 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 ANKRD36A6QL64 1941 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 ALPK3Q96L96 1907 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 LOC102725191A0A1B0GVB3 256 aa7.12□□□□□ -1.27
LRP6-206ENST00000543091 ZNF587BE7ETH6 402 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms