RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ITGA5P08648 1049 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 HPCAP84074 193 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 CHI3L2Q15782 390 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 SAXO2Q658L1 398 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 OR7E24Q6IFN5 339 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 OR10H5Q8NGA6 315 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 CNOT9Q92600 299 aaKnown RBP21.08■□□□□ 0.97
LEMD3-203ENST00000541171 MUS81Q96NY9 551 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 SLC35A5Q9BS91 424 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 TMEM181Q9P2C4 612 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 UPB1Q9UBR1 384 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 MALT1Q9UDY8 824 aa21.08■□□□□ 0.97
LEMD3-203ENST00000541171 MXRA5Q9NR99 2828 aa21.08■□□□□ 0.96
LEMD3-203ENST00000541171 PLCE1Q9P212 2302 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 TMED7-TICAM2A0A0A6YYA0 188 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 PRAMEF27A3QJZ7 478 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 AP3D1O14617 1153 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 C1QCP02747 245 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 GUSBP08236 651 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 FKBP2P26885 142 aaKnown RBP21.07■□□□□ 0.96
LEMD3-203ENST00000541171 CLK1P49759 484 aaKnown RBP21.07■□□□□ 0.96
LEMD3-203ENST00000541171 SLC16A1P53985 500 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 DSCR9P59020 149 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 ABCE1P61221 599 aaKnown RBP21.07■□□□□ 0.96
LEMD3-203ENST00000541171 PLAURQ03405 335 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 SPANXN4Q5MJ08 99 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 ZNF525Q8N782 197 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 OIT3Q8WWZ8 545 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 NEURL3Q96EH8 262 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 ZIM3Q96PE6 472 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 EXOSC3Q9NQT5 275 aaKnown RBP21.07■□□□□ 0.96
LEMD3-203ENST00000541171 TMED7Q9Y3B3 224 aa21.07■□□□□ 0.96
LEMD3-203ENST00000541171 TMEM72A0PK05 275 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 DNPH1O43598 174 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 MYZAPP0CAP1 466 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 CASP8Q14790 479 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 TMEM249Q2WGJ8 235 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 C6orf52Q5T4I8 152 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 ANKFN1Q8N957 763 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 WDR31Q8NA23 367 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 AENQ8WTP8 325 aaKnown RBP21.06■□□□□ 0.96
LEMD3-203ENST00000541171 TNFRSF13CQ96RJ3 184 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 NAA11Q9BSU3 229 aaPredicted RBP21.06■□□□□ 0.96
LEMD3-203ENST00000541171 INPP5KQ9BT40 448 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 MANSC1Q9H8J5 431 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 TRAPPC4Q9Y296 219 aa21.06■□□□□ 0.96
LEMD3-203ENST00000541171 A0A096LNT2 108 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 SERPINE1P05121 402 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 IMPDH2P12268 514 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 HTR3AP46098 478 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 NME5P56597 212 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 SLC35A1P78382 337 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 SYPL1Q16563 259 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 RNF130Q86XS8 419 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 PHC2Q8IXK0 858 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 TESCQ96BS2 214 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 DDIT4LQ96D03 193 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 C20orf27Q9GZN8 174 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 SLC7A10Q9NS82 523 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 PARPBPQ9NWS1 579 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 OSGIN1Q9UJX0 560 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 RAP2CQ9Y3L5 183 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 FLVCR1Q9Y5Y0 555 aa21.05■□□□□ 0.96
LEMD3-203ENST00000541171 HMGN4O00479 90 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 TACR3P29371 465 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 S100A3P33764 101 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 RPL14P50914 215 aaKnown RBP21.04■□□□□ 0.96
LEMD3-203ENST00000541171 POLR2HP52434 150 aaKnown RBP21.04■□□□□ 0.96
LEMD3-203ENST00000541171 H3F3AP84243 136 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 FAM174BQ3ZCQ3 159 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 TSPO2Q5TGU0 170 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 ZNF544Q6NX49 715 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 FAM168AQ92567 244 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 KCNK17Q96T54 332 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 NUF2Q9BZD4 464 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 SLC17A5Q9NRA2 495 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 SLC9A8Q9Y2E8 581 aa21.04■□□□□ 0.96
LEMD3-203ENST00000541171 ELOA3DA6NLF2 546 aaPredicted RBP21.03■□□□□ 0.96
LEMD3-203ENST00000541171 PDLIM1O00151 329 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 EIF1BO60739 113 aaKnown RBP21.03■□□□□ 0.96
LEMD3-203ENST00000541171 LBPP18428 481 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 CLNS1AP54105 237 aaKnown RBP21.03■□□□□ 0.96
LEMD3-203ENST00000541171 SLC25A3Q00325 362 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 LOXL1Q08397 574 aaPredicted RBP21.03■□□□□ 0.96
LEMD3-203ENST00000541171 ELOA3BQ3SY89 546 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 AP1ARQ63HQ0 302 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 ELOA3Q8NG57 546 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 PMM1Q92871 262 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 FKRPQ9H9S5 495 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.03■□□□□ 0.96
LEMD3-203ENST00000541171 DCTN4Q9UJW0 460 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 AMDHD2Q9Y303 409 aa21.03■□□□□ 0.96
LEMD3-203ENST00000541171 V9GYY5 206 aaPredicted RBP21.03■□□□□ 0.96
LEMD3-203ENST00000541171 ZC3H12DA2A288 527 aaKnown RBP21.02■□□□□ 0.96
LEMD3-203ENST00000541171 H7C417 338 aa21.02■□□□□ 0.96
LEMD3-203ENST00000541171 ZNF208O43345 1280 aa21.02■□□□□ 0.96
LEMD3-203ENST00000541171 CHRM4P08173 479 aa21.02■□□□□ 0.96
LEMD3-203ENST00000541171 SLC25A16P16260 332 aa21.02■□□□□ 0.96
LEMD3-203ENST00000541171 CDH2P19022 906 aaPredicted RBP21.02■□□□□ 0.96
LEMD3-203ENST00000541171 SLC1A6P48664 564 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms