RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 BPIFB6Q8NFQ5 453 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 OR1N1Q8NGS0 311 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 OR8K3Q8NH51 312 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 C16orf52Q8NHV5 167 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 RAB2BQ8WUD1 216 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 TM9SF4Q92544 642 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 DIO2Q92813 273 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 GTPBP3Q969Y2 492 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 DTNBP1Q96EV8 351 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 PLEKHA8Q96JA3 519 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 COX4I2Q96KJ9 171 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 POLDIP3Q9BY77 421 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 CXorf56Q9H5V9 222 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 SLC25A19Q9HC21 320 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 PNO1Q9NRX1 252 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 CHCHD3Q9NX63 227 aaKnown RBP7.63□□□□□ -1.19
CHD4-208ENST00000540960 MKL2Q9ULH7 1088 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 PCDHGB5Q9Y5G0 923 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 KCNE3Q9Y6H6 103 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 SEC16AO15027 2179 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 HEATR5BQ9P2D3 2071 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 SVEP1Q4LDE5 3571 aa7.63□□□□□ -1.19
CHD4-208ENST00000540960 A0A1W2PQD3 144 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 PRAMEF25A6NGN4 478 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 PTGES3LE9PB15 166 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 NPIPB9F8W1W9 429 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 H7C1Q1 480 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 J3KTA2 159 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 GTPBP1O00178 669 aaKnown RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 HCRTR1O43613 425 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 CHP2O43745 196 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 EIF4E2O60573 245 aaKnown RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 HCN1O60741 890 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 DNAJB6O75190 326 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 CLIC3O95833 236 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 CSTAP01040 98 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 LINGO3P0C6S8 592 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 UBL4AP11441 157 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 CYP4B1P13584 511 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 TBXA2RP21731 343 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 CHMP24386 653 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 POU1F1P28069 291 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 OTX2P32243 289 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 OR1D4P47884 311 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 GIPRP48546 466 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 GSSP48637 474 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 SLC9A3P48764 834 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 MAP2K6P52564 334 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 PNLIPRP2P54317 469 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 EMP2P54851 167 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 SLC37A1P57057 533 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 SLC35A2P78381 396 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 BTG2P78543 158 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 RHAGQ02094 409 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 PPP1R8Q12972 351 aaKnown RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 C1DQ13901 141 aaKnown RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 FGFBP1Q14512 234 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.62□□□□□ -1.192e-11■■■■□ 21.2
CHD4-208ENST00000540960 TIMM50Q3ZCQ8 353 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 TMEM201Q5SNT2 666 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 PRAMEF17Q5VTA0 474 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 RNLSQ5VYX0 342 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 FIGNL1Q6PIW4 674 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 C5orf46Q6UWT4 87 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 SATL1Q86VE3 508 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 ERI1Q8IV48 349 aaKnown RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 DMRTC2Q8IXT2 367 aaPredicted RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 DND1Q8IYX4 353 aaKnown RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 SPARTQ8N0X7 666 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 STX19Q8N4C7 294 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 SLC15A4Q8N697 577 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 NUBPLQ8TB37 319 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 SLC2A12Q8TD20 617 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 PTPMT1Q8WUK0 201 aaPredicted RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 PIK3R3Q92569 461 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 NACC2Q96BF6 587 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 MBD6Q96DN6 1003 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 LPAR4Q99677 370 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 COPS4Q9BT78 406 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 OR8D2Q9GZM6 311 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 CCDC90BQ9GZT6 254 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 NECTIN3Q9NQS3 549 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 SDHAF3Q9NRP4 125 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 H2AFY2Q9P0M6 372 aaPredicted RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 LRFN1Q9P244 771 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD4-208ENST00000540960 PPIEQ9UNP9 301 aaKnown RBP7.62□□□□□ -1.19
CHD4-208ENST00000540960 MEMO1Q9Y316 297 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 MAU2Q9Y6X3 613 aa7.62□□□□□ -1.19
CHD4-208ENST00000540960 ANK3Q12955 4377 aaKnown RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 A0A087WUU8 490 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 A0A1W2PS29 197 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 NKX2-6A6NCS4 301 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CPSF4LA6NMK7 179 aaKnown RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 ZNF99A8MXY4 864 aaPredicted RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 ZNHIT1O43257 154 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 SPRY1O43609 319 aaPredicted RBP7.61□□□□□ -1.19
CHD4-208ENST00000540960 SLC19A2O60779 497 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 ALOX12BO75342 701 aa7.61□□□□□ -1.19
CHD4-208ENST00000540960 CTAG2O75638 210 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms