RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 NCALDP61601 193 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 TLE4Q04727 773 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 FAM27E3Q08E93 113 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 RASGEF1BQ0VAM2 473 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 BNIP2Q12982 314 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 DUSP7Q16829 419 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 TMEM201Q5SNT2 666 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 INTS11Q5TA45 600 aaKnown RBP8.23□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF474Q6S9Z5 364 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-215ENST00000540904 PATL1Q86TB9 770 aaKnown RBP8.23□□□□□ -1.09
SNHG1-215ENST00000540904 CALHM3Q86XJ0 350 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 TUSC5Q8IXB3 177 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 BHLHE22Q8NFJ8 381 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-215ENST00000540904 OR52E4Q8NGH9 312 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 OR6K3Q8NGY3 331 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 RNF217Q8TC41 542 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 SLC26A7Q8TE54 656 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 C3orf49Q96BT1 292 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 CMTM5Q96DZ9 223 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 ZHX1-C8orf76Q96EF9 292 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF559Q9BR84 538 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 PRR14Q9BWN1 585 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 MYLK2Q9H1R3 596 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 C12orf49Q9H741 205 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 EFCAB1Q9HAE3 211 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 PLSCR4Q9NRQ2 329 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 CRIM1Q9NZV1 1036 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 TMEM181Q9P2C4 612 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 KLHL9Q9P2J3 617 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 RPS6KB2Q9UBS0 482 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 KCNN3Q9UGI6 736 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 PRDM4Q9UKN5 801 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 USP22Q9UPT9 525 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 ADGRG4Q8IZF6 3080 aa8.23□□□□□ -1.09
SNHG1-215ENST00000540904 CACNA1CQ13936 2221 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 A8MVM7 634 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 M0R3H8 397 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 CYTIPO60759 359 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 PMS2P2O95744 297 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 YES1P07947 543 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 IMPDH2P12268 514 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 POU2F1P14859 743 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 FPR1P21462 350 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 HTR2AP28223 471 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 IDUAP35475 653 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 MAP2K6P52564 334 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 SORDQ00796 357 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 NUFIP2Q7Z417 695 aaKnown RBP8.22□□□□□ -1.09
SNHG1-215ENST00000540904 ATG4DQ86TL0 474 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-215ENST00000540904 STK32CQ86UX6 486 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 RANBP3LQ86VV4 465 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-215ENST00000540904 CCDC103Q8IW40 242 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 LSMEM1Q8N8F7 131 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 GPR32P1Q8NGA4 272 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 LINC01560Q8TB33 94 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF775Q96BV0 537 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-215ENST00000540904 TAMM41Q96BW9 452 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 C14orf79Q96F83 325 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF583Q96ND8 569 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF300Q96RE9 604 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-215ENST00000540904 PSD2Q9BQI7 771 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 WFDC6Q9BQY6 131 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 GPATCH1Q9BRR8 931 aaKnown RBP8.22□□□□□ -1.09
SNHG1-215ENST00000540904 GP6Q9HCN6 339 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 ELOVL5Q9NYP7 299 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 SELENONQ9NZV5 590 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 TESQ9UGI8 421 aaKnown RBP8.22□□□□□ -1.09
SNHG1-215ENST00000540904 TRAPPC4Q9Y296 219 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 ARL2BPQ9Y2Y0 163 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 HEATR5AQ86XA9 2040 aa8.22□□□□□ -1.09
SNHG1-215ENST00000540904 DOCK7Q96N67 2140 aa8.21□□□□□ -1.09
SNHG1-215ENST00000540904 A0A1B0GWA3 101 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ELOA3DA6NLF2 546 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-215ENST00000540904 FAM220BPB1ANY3 271 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF814B7Z6K7 855 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 DNPH1O43598 174 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 RAMP1O60894 148 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 LGI1O95970 557 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 GPIP06744 558 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 UGT2B10P36537 528 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 CD79BP40259 229 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 SLC7A2P52569 658 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 CRYBA2P53672 197 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 SLC35A1P78382 337 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 LIPEQ05469 1076 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 CEACAM7Q14002 265 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 VEZF1Q14119 521 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 OR1Q1Q15612 314 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 OR7A5Q15622 319 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ELOA3BQ3SY89 546 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 LRRC23Q53EV4 343 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ALG10BQ5I7T1 473 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 C1orf140Q5VVS0 124 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ABLIM2Q6H8Q1 611 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ERICH5Q6P6B1 374 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 CCDC80Q76M96 950 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ARPINQ7Z6K5 226 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 PIGWQ7Z7B1 504 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms