RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 GNA13Q14344 377 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 ZSWIM7Q19AV6 140 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 ZNF672Q499Z4 452 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 MRPL2Q5T653 305 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 C1QTNF12Q5T7M4 302 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 CLEC9AQ6UXN8 241 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 HMGN2P46Q86SG4 172 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 ZNF440Q8IYI8 595 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 ZNF775Q96BV0 537 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 ZBTB9Q96C00 473 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 ZHX1-C8orf76Q96EF9 292 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 BOD1Q96IK1 185 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 MUS81Q96NY9 551 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 OR52B2Q96RD2 323 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 TRIM2Q9C040 744 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 OR11A1Q9GZK7 315 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 PIF1Q9H611 641 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 THUMPD1Q9NXG2 353 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 CALML5Q9NZT1 146 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 MALT1Q9UDY8 824 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 TMED7Q9Y3B3 224 aa11.57□□□□□ -0.56
SEMA4D-223ENST00000540475 TMEM72A0PK05 275 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 CFAP73A6NFT4 308 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 H7C1Q1 480 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 RAMP1O60894 148 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 LYZL6O75951 148 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 NR2F1P10589 423 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 TFPIP10646 304 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 KITP10721 976 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 BMP2P12643 396 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 IL7RP16871 459 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 HOXB9P17482 250 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 CR1P17927 2039 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 GGT1P19440 569 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 TACR3P29371 465 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 SLC35A1P78382 337 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 BSPH1Q075Z2 132 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 PPA1Q15181 289 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 RNF220Q5VTB9 566 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 PAQR6Q6TCH4 344 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 EPGNQ6UW88 154 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 DNM1P46Q6ZS02 220 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 PEX5LQ8IYB4 626 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 ZNF100Q8IYN0 542 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 MGARPQ8TDB4 240 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 SLC38A5Q8WUX1 472 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 SLC35B4Q969S0 331 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 FBXW5Q969U6 566 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 DDIT4LQ96D03 193 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 ITCHQ96J02 903 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 RADILQ96JH8 1075 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 AMBRA1Q9C0C7 1298 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 TPT1P8Q9HAU6 139 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 BCL2L10Q9HD36 194 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 NKIRAS1Q9NYS0 192 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 NPAP1Q9NZP6 1156 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 P2RX2Q9UBL9 471 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 NOSIPQ9Y314 301 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 CHST2Q9Y4C5 530 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 GMEB1Q9Y692 573 aa11.56□□□□□ -0.56
SEMA4D-223ENST00000540475 A0A0G2JPF8 293 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 FAM234BA2RU67 622 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 TRIM64A6NGJ6 449 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 TRIM64BA6NI03 449 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 HNRNPCL2B2RXH8 293 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 SHISA9B4DS77 424 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 HNRNPCL3B7ZW38 293 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 UBDO15205 165 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 ERLIN1O75477 346 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 SOD3P08294 240 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 HNRNPCL4P0DMR1 293 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 ETFAP13804 333 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 POLR2JP52435 117 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 RPS4XP62701 263 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 SLC17A1Q14916 467 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 ETFDHQ16134 617 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 GABRA6Q16445 453 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 PGGHGQ32M88 737 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 PRAMEF8Q5VWM4 474 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 PRAMEF7Q5VXH5 474 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 DTX2Q86UW9 622 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 OR52P1PQ8NH57 321 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 PNPT1Q8TCS8 783 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 SMAP2Q8WU79 429 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 GTF2H4Q92759 462 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 APH1AQ96BI3 265 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 MUCL1Q96DR8 90 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 C7orf26Q96N11 449 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 NAA11Q9BSU3 229 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 SF3B5Q9BWJ5 86 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 PAIP1Q9H074 479 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 RMND5AQ9H871 391 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 RLIMQ9NVW2 624 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 TAS2R16Q9NYV7 291 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 LAMP3Q9UQV4 416 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 FLVCR1Q9Y5Y0 555 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms