RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TUBGCP3Q96CW5 907 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 DDIT4LQ96D03 193 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 DNAJA3Q96EY1 480 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 ARL5BQ96KC2 179 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 ZNF350Q9GZX5 532 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 POLE3Q9NRF9 147 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.94□□□□□ -0.66
COPS7A-211ENST00000540408 GIMAP2Q9UG22 337 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 KCNE5Q9UJ90 142 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 WDR45Q9Y484 360 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 RNF103-CHMP3A0A140T963 221 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 LOC390937A0A1W2PQ73 354 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 KIAA0513O60268 411 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 TGFAP01135 160 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 SHBGP04278 402 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 GUSBP08236 651 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 CCNA2P20248 432 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 IGFBP5P24593 272 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 MPGP29372 298 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 ALDH3A1P30838 453 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 NTF4P34130 210 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 SERPINB5P36952 375 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 IDH2P48735 452 aaKnown RBP10.93□□□□□ -0.66
COPS7A-211ENST00000540408 MAP2K6P52564 334 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 HPCAP84074 193 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 XKR7Q5GH72 579 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 ADGRG3Q86Y34 549 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 RIMKLAQ8IXN7 391 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 WDR31Q8NA23 367 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 VPS37AQ8NEZ2 397 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 VRK1Q99986 396 aaPredicted RBP10.93□□□□□ -0.66
COPS7A-211ENST00000540408 RHOXF2Q9BQY4 288 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 OR11A1Q9GZK7 315 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 OR51I1Q9H343 314 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 EXOSC3Q9NQT5 275 aaKnown RBP10.93□□□□□ -0.66
COPS7A-211ENST00000540408 FBXO9Q9UK97 447 aaPredicted RBP10.93□□□□□ -0.66
COPS7A-211ENST00000540408 MOKQ9UQ07 419 aa10.93□□□□□ -0.66
COPS7A-211ENST00000540408 VSTM5A8MXK1 200 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 ATP6V1G2-DDX39BF2Z307 99 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 PDLIM1O00151 329 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 RNASET2O00584 256 aaKnown RBP10.92□□□□□ -0.66
COPS7A-211ENST00000540408 SKAP2O75563 359 aaPredicted RBP10.92□□□□□ -0.66
COPS7A-211ENST00000540408 KRT33AO76009 404 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 LY6HO94772 140 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 OR12D1P0DN82 309 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 UQCRBP14927 111 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 CDH2P19022 906 aaPredicted RBP10.92□□□□□ -0.66
COPS7A-211ENST00000540408 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
COPS7A-211ENST00000540408 CLDN8P56748 225 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 KCNJ10P78508 379 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 H3F3AP84243 136 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 EMX2Q04743 252 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 MAPK14Q16539 360 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 SWI5Q1ZZU3 235 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 GPAT3Q53EU6 434 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 TSPO2Q5TGU0 170 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 OR4F3Q6IEY1 312 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 TYW3Q6IPR3 259 aaKnown RBP10.92□□□□□ -0.66
COPS7A-211ENST00000540408 IL17RELQ6ZVW7 336 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 SLC46A3Q7Z3Q1 461 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 CLEC4FQ8N1N0 589 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 POMGNT2Q8NAT1 580 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 FAM71CQ8NEG0 241 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 OR4A15Q8NGL6 344 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 MIPOL1Q8TD10 442 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 ROPN1LQ96C74 230 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 MSI2Q96DH6 328 aaKnown RBP10.92□□□□□ -0.66
COPS7A-211ENST00000540408 C3orf30Q96M34 536 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 SERHL2Q9H4I8 314 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 OBP2BQ9NPH6 170 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 SLC7A10Q9NS82 523 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 NOP53Q9NZM5 478 aaKnown RBP10.92□□□□□ -0.66
COPS7A-211ENST00000540408 FLVCR1Q9Y5Y0 555 aa10.92□□□□□ -0.66
COPS7A-211ENST00000540408 YLPM1P49750 1951 aaKnown RBP10.91□□□□□ -0.66
COPS7A-211ENST00000540408 TMED7-TICAM2A0A0A6YYA0 188 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 CENPVL1A0A0U1RR11 272 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 TLDC2A0PJX2 215 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 SLC35F4A4IF30 521 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 VWC2LB2RUY7 222 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 B9A039 149 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 ZNF208O43345 1280 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 CRYAAP02489 173 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 PGRP06401 933 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 ERCC1P07992 297 aaPredicted RBP10.91□□□□□ -0.66
COPS7A-211ENST00000540408 G6PDP11413 515 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 UQCRC2P22695 453 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 SERPINF1P36955 418 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 POLR2HP52434 150 aaKnown RBP10.91□□□□□ -0.66
COPS7A-211ENST00000540408 GNA13Q14344 377 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 SLC17A1Q14916 467 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 ANXA8L1Q5VT79 327 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 EMBQ6PCB8 327 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 OLIG3Q7RTU3 272 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 AAED1Q7RTV5 226 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 CLECL1Q8IZS7 167 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 KIF18AQ8NI77 898 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 EPS8L3Q8TE67 593 aaKnown RBP10.91□□□□□ -0.66
COPS7A-211ENST00000540408 APOPT1Q96IL0 206 aa10.91□□□□□ -0.66
COPS7A-211ENST00000540408 FOXN4Q96NZ1 517 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms