RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 C12orf49Q9H741 205 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 KLHL13Q9P2N7 655 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 HDGFL3Q9Y3E1 203 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 TEX15Q9BXT5 2789 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 LRBAP50851 2863 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 TUBAL3A6NHL2 446 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 M0QX08 132 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 CYTIPO60759 359 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 CXCR1P25024 350 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 PCGF2P35227 344 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 CD79BP40259 229 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 CRYBA2P53672 197 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 COPZ1P61923 177 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 CSNK2A1P68400 391 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 DUSP7Q16829 419 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 VMACQ2NL98 169 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 SLC43A2Q8N370 569 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 GPR32P1Q8NGA4 272 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF775Q96BV0 537 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 DDIT4LQ96D03 193 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF583Q96ND8 569 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 MCCC2Q9HCC0 563 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 TACC2O95359 2948 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 CSMD2Q7Z408 3487 aa16.29■□□□□ 0.2
SNRPA1-203ENST00000540017 TPST2O60704 377 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 RAMP1O60894 148 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 SERPINB7O75635 380 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 YES1P07947 543 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 FKBP2P26885 142 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 CCKARP32238 428 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 PEX19P40855 299 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 OR2B6P58173 313 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 RASGEF1BQ0VAM2 473 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 EXOC3L2Q2M3D2 409 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 CPLX4Q7Z7G2 160 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 ATG4DQ86TL0 474 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 PCYOX1LQ8NBM8 494 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 TAMM41Q96BW9 452 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF300Q96RE9 604 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 SH3GL1Q99961 368 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 ECSITQ9BQ95 431 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 BCO1Q9HAY6 547 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 SLC24A3Q9HC58 644 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 GID8Q9NWU2 228 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 TMEM181Q9P2C4 612 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 GMPR2Q9P2T1 348 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 PRDM4Q9UKN5 801 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 TRAPPC4Q9Y296 219 aa16.28■□□□□ 0.2
SNRPA1-203ENST00000540017 MPDZO75970 2070 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 PDZD2O15018 2839 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 PRORSD1PA6NEY8 169 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 CCT8L1PA6NM43 557 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 TMEM229AB2RXF0 380 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 AIM2O14862 343 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 CD247P20963 164 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 FPR1P21462 350 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 EDNRAP25101 427 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 MAP2K6P52564 334 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 H3F3AP84243 136 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 TMEM201Q5SNT2 666 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 ABLIM2Q6H8Q1 611 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 CCDC103Q8IW40 242 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 LSMEM1Q8N8F7 131 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 FAM222BQ8WU58 562 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 LURAP1Q96LR2 239 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 GPATCH1Q9BRR8 931 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 NSRP1Q9H0G5 558 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 GP6Q9HCN6 339 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 CMTM6Q9NX76 183 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 KLHL9Q9P2J3 617 aa16.27■□□□□ 0.2
SNRPA1-203ENST00000540017 A0A1B0GWA3 101 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 ZNF716A6NP11 495 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 M0R3H8 397 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 NPIPB7O75200 414 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 LGI1O95970 557 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 EPXP11678 715 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 POU2F1P14859 743 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 UGT2B10P36537 528 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 KCNJ5P48544 419 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 PCYT1AP49585 367 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 TFAP2EQ6VUC0 442 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 C22orf34Q6ZV56 151 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 CCDC80Q76M96 950 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC30A8Q8IWU4 369 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 OR4D11Q8NGI4 311 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 ARHGDIGQ99819 225 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 POTEKPQ9BYX7 375 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 ELOVL5Q9NYP7 299 aa16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 ANKHD1Q8IWZ3 2542 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-203ENST00000540017 FAM221AA4D161 298 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 SH3D21A4FU49 640 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 LIPT2A6NK58 231 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 A8MVM7 634 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 DNPH1O43598 174 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 CTAG2O75638 210 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 NTF4P34130 210 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 RGS8P57771 180 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 EGR4Q05215 589 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 CEACAM7Q14002 265 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 NPTX1Q15818 432 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms