RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 PIP5K1AQ99755 562 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 POTEKPQ9BYX7 375 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 OR11A1Q9GZK7 315 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 ADAM19Q9H013 955 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 SLC52A3Q9NQ40 469 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 SLC25A37Q9NYZ2 338 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 TMEM181Q9P2C4 612 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 TRIM33Q9UPN9 1127 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 TMED7Q9Y3B3 224 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 PRRC2AP48634 2157 aaKnown RBP10.26□□□□□ -0.77
RTN3-209ENST00000538995 TRBV5-3A0A0A0MS03 114 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.25□□□□□ -0.77
RTN3-209ENST00000538995 A0A1W2PP18 115 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 TMEM72A0PK05 275 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 ZNF716A6NP11 495 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 ZNF814B7Z6K7 855 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 C5orf58C9J3I9 102 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 KLF4O43474 513 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 ARAFP10398 606 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 ETS2P15036 469 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 KLK2P20151 261 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 COX5AP20674 150 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 ACAA2P42765 397 aaKnown RBP10.25□□□□□ -0.77
RTN3-209ENST00000538995 SLC35A1P78382 337 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 H3F3AP84243 136 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 AGKQ53H12 422 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 RPS26P11Q5JNZ5 115 aaPredicted RBP10.25□□□□□ -0.77
RTN3-209ENST00000538995 GCNT6Q5T4J0 391 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 MSRB3Q8IXL7 192 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 HSD17B8Q92506 261 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 PIGTQ969N2 578 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 S100PBPQ96BU1 408 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 ZNF300Q96RE9 604 aaPredicted RBP10.25□□□□□ -0.77
RTN3-209ENST00000538995 NGBQ9NPG2 151 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 RLIMQ9NVW2 624 aa10.25□□□□□ -0.77
RTN3-209ENST00000538995 EDF1O60869 148 aaKnown RBP10.24□□□□□ -0.77
RTN3-209ENST00000538995 TMCC2O75069 709 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 SASH3O75995 380 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 PGM3O95394 542 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 ADAP00813 363 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 GPIP06744 558 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 NUDT7P0C024 238 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 CXCR1P25024 350 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 PRKAR1BP31321 381 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 IDUAP35475 653 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 OR2B6P58173 313 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 ACKR1Q16570 336 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 ZNF311Q5JNZ3 666 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 PAGE3Q5JUK9 113 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 PAQR6Q6TCH4 344 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 KRT73Q86Y46 540 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 WFDC8Q8IUA0 241 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 ZNF100Q8IYN0 542 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 LRRC75A-AS1Q8N1F1 130 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 CLIP4Q8N3C7 705 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 TSPEARQ8WU66 669 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 MAL2Q969L2 176 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 APH1AQ96BI3 265 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 TMEM204Q9BSN7 226 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 NAA11Q9BSU3 229 aaPredicted RBP10.24□□□□□ -0.77
RTN3-209ENST00000538995 SPATA5L1Q9BVQ7 753 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 PIF1Q9H611 641 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 ZNF385DQ9H6B1 395 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 TMEM38AQ9H6F2 299 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 MRGBPQ9NV56 204 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 VAPAQ9P0L0 249 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 LEF1Q9UJU2 399 aaPredicted RBP10.24□□□□□ -0.77
RTN3-209ENST00000538995 SLC9A8Q9Y2E8 581 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 NOSIPQ9Y314 301 aaKnown RBP10.24□□□□□ -0.77
RTN3-209ENST00000538995 CHST2Q9Y4C5 530 aa10.24□□□□□ -0.77
RTN3-209ENST00000538995 FLNAP21333 2647 aaKnown RBP10.23□□□□□ -0.77
RTN3-209ENST00000538995 LIPT2A6NK58 231 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 A8MVM7 634 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 EVPLLA8MZ36 301 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 GKN3PP0CG01 181 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 IMPDH2P12268 514 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 CD99P14209 185 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 GPX2P18283 190 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 NCF2P19878 526 aaPredicted RBP10.23□□□□□ -0.77
RTN3-209ENST00000538995 CCNA2P20248 432 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 CDK6Q00534 326 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 TAB1Q15750 504 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 METTL21CQ5VZV1 264 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 FBXW9Q5XUX1 488 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 REEP3Q6NUK4 255 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 DHRS4L2Q6PKH6 230 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 ZNF704Q6ZNC4 412 aaPredicted RBP10.23□□□□□ -0.77
RTN3-209ENST00000538995 BHLHA15Q7RTS1 189 aaPredicted RBP10.23□□□□□ -0.77
RTN3-209ENST00000538995 SERPINA11Q86U17 422 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 P2RY8Q86VZ1 359 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 CADM2Q8N3J6 435 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 DPP10Q8N608 796 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 PLPPR2Q96GM1 343 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 CCL19Q99731 98 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 SF3B5Q9BWJ5 86 aaKnown RBP10.23□□□□□ -0.77
RTN3-209ENST00000538995 UBTD1Q9HAC8 227 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 C12orf10Q9HB07 376 aa10.23□□□□□ -0.77
RTN3-209ENST00000538995 NPHS2Q9NP85 383 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms