RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MYL12AP19105 171 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 SLC1A3P43003 542 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 RPS18P62269 152 aaKnown RBP12.88□□□□□ -0.35
ACTN1-205ENST00000538545 LCN6P62502 163 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 SLC25A30Q5SVS4 291 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 NXNL2Q5VZ03 156 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 NIPAL3Q6P499 406 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 SYT14Q8NB59 555 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 C9orf43Q8TAL5 461 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-205ENST00000538545 KISS1RQ969F8 398 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-205ENST00000538545 NMNAT3Q96T66 252 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 PCDHGA3Q9Y5H0 932 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 NPFFR2Q9Y5X5 522 aa12.88□□□□□ -0.35
ACTN1-205ENST00000538545 CPAMD8Q8IZJ3 1885 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 PLD2O14939 933 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 OPN1LWP04000 364 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 EVI2BP34910 448 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 BIKQ13323 160 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 YOD1Q5VVQ6 348 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 PHC2Q8IXK0 858 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 GALNT6Q8NCL4 622 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 ZMYND19Q96E35 227 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 ZNF649Q9BS31 505 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 OR11A1Q9GZK7 315 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 FBXO4Q9UKT5 387 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 EXPH5Q8NEV8 1989 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 OTOGLQ3ZCN5 2332 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 SAGE2PA6NJ88 616 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 C12orf71A8MTZ7 269 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 PRR23D1E9PI22 279 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 LDOC1O95751 146 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 SCG5P05408 212 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 PRR23D2P0DMB1 279 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 AVPR2P30518 371 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 RPS25P62851 125 aaKnown RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 RAB40BQ12829 278 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 DYNC1I2Q13409 638 aaKnown RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 MADCAM1Q13477 382 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 WBP2NLQ6ICG8 309 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 CMIPQ8IY22 773 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 FAM98AQ8NCA5 519 aaKnown RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 ATP6V1C2Q8NEY4 427 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 PROKR2Q8NFJ6 384 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 SMAD5Q99717 465 aaKnown RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 KATNB1Q9BVA0 655 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 C6orf62Q9GZU0 229 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-205ENST00000538545 CMC2Q9NRP2 79 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 OSGIN1Q9UJX0 560 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 ICAM5Q9UMF0 924 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 VDAC3Q9Y277 283 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 TMEM5Q9Y2B1 443 aa12.87□□□□□ -0.35
ACTN1-205ENST00000538545 SLC35F4A4IF30 521 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 HMGN1P05114 100 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 ZFP36L1Q07352 338 aaKnown RBP12.86□□□□□ -0.35
ACTN1-205ENST00000538545 DCTN2Q13561 401 aaKnown RBP12.86□□□□□ -0.35
ACTN1-205ENST00000538545 RTL4Q6ZR62 310 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 CPEB2Q7Z5Q1 589 aaKnown RBP12.86□□□□□ -0.35
ACTN1-205ENST00000538545 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 OR10H4Q8NGA5 316 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 DNAJA4Q8WW22 397 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-205ENST00000538545 SPRYD4Q8WW59 207 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-205ENST00000538545 TAAR8Q969N4 342 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 SLC25A36Q96CQ1 311 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 LPAR4Q99677 370 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 ADAM10O14672 748 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 MAGEB3O15480 346 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 OR2J2O76002 312 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 HTR1FP30939 366 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 NAA10P41227 235 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-205ENST00000538545 WNT4P56705 351 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 FOXK1P85037 733 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 KLHL22Q53GT1 634 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 SSX6Q7RTT6 188 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 Q96M85 177 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 TEAD3Q99594 435 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 MED11Q9P086 117 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 TNFRSF10DQ9UBN6 386 aa12.86□□□□□ -0.35
ACTN1-205ENST00000538545 PTRH2Q9Y3E5 179 aaKnown RBP12.86□□□□□ -0.35
ACTN1-205ENST00000538545 VSTM2BA6NLU5 285 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 C11orf98E9PRG8 122 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 PSMD9O00233 223 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 PLGP00747 810 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 GRPRP30550 384 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 CRYBB2P43320 205 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 MRPL14Q6P1L8 145 aaKnown RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 KLBQ86Z14 1044 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 KDM8Q8N371 416 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 KCNS3Q9BQ31 491 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 ALG1L2C9J202 215 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 YKT6O15498 198 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 FADS1O60427 444 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 CPNE3O75131 537 aaKnown RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 GUSBP08236 651 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 PAICSP22234 425 aaKnown RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 RBM34P42696 430 aaKnown RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 CAV3P56539 151 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 COL28A1Q2UY09 1125 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms