RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 CCDC88AQ3V6T2 1871 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 LOC100289279A0A1B0GTE1 492 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 C2orf72A6NCS6 295 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 POM121CA8CG34 1229 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 GABRR3A8MPY1 467 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SYT5O00445 386 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 COCHO43405 550 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 OR2C1O95371 312 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 CSF3P09919 207 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FOLR1P15328 257 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 GJA5P36382 358 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ZNF140P52738 457 aaPredicted RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 TAZQ16635 292 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 CLPPQ16740 277 aaPredicted RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 ADPRMQ3LIE5 342 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 H3F3CQ6NXT2 135 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 LILRA2Q8N149 483 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 OR2L13Q8N349 312 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 NANOGP1Q8N7R0 232 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 IGSF8Q969P0 613 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 TMEM43Q9BTV4 400 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 HCAR1Q9BXC0 346 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SLC6A17Q9H1V8 727 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 HIPK2Q9H2X6 1198 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 C8orf33Q9H7E9 229 aaPredicted RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 TAF9BQ9HBM6 251 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 HRASLS2Q9NWW9 162 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 RAB22AQ9UL26 194 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 PIK3C2AO00443 1686 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 HSPB2A8KAH6 182 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 F6UZH7 168 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 JTBO76095 146 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 TK1P04183 234 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 TNFRSF1BP20333 461 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 KITLGP21583 273 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 HTR2CP28335 458 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FOXA1P55317 472 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 PCBD1P61457 104 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 LMAN2Q12907 356 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 HSPB2Q16082 182 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 RPE65Q16518 533 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FAM213BQ8TBF2 198 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 GCDHQ92947 438 aaPredicted RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 IRF7Q92985 503 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ATOH8Q96SQ7 321 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 PAPOLGQ9BWT3 736 aaKnown RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 PDE7BQ9NP56 450 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SPHK1Q9NYA1 384 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FBXL2Q9UKC9 423 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 TRABD2BA6NFA1 517 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ZNF587BE7ETH6 402 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 PTHP01270 115 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 EMP2P54851 167 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SIRPAP78324 504 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 CATR1Q13166 79 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 CARD17Q5XLA6 110 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FAM111BQ6SJ93 734 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 MEX3BQ6ZN04 569 aaKnown RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 ZNF620Q6ZNG0 422 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 OR4D6Q8NGJ1 314 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 OR14L1PQ8NHC6 308 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 C12orf57Q99622 126 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 PCDHB10Q9UN67 800 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 MYH10P35580 1976 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 A0A0U1RQK1 487 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 DCDC2BA2VCK2 349 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 MROH6A6NGR9 719 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 WTIPA6NIX2 430 aaPredicted RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 SCO2O43819 266 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 PIP5K1CO60331 668 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SOD2P04179 222 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ALDOCP09972 364 aaKnown RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 CPN1P15169 458 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 AANATQ16613 207 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 FIGNL1Q6PIW4 674 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ACOT7LQ6ZUV0 252 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 Q6ZVL8 140 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SERPINA12Q8IW75 414 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ADGRF3Q8IZF5 1079 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 COMMD1Q8N668 190 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 BOLLQ8N9W6 283 aaKnown RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 TEX19Q8NA77 164 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 NAXEQ8NCW5 288 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SDR9C7Q8NEX9 313 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 TSTD1Q8NFU3 115 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 KCNG3Q8TAE7 436 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 LGALS14Q8TCE9 139 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 LRRC15Q8TF66 581 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 APH1BQ8WW43 257 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 KLK6Q92876 244 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SLC35B4Q969S0 331 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 ISG20Q96AZ6 181 aaKnown RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 SENP5Q96HI0 755 aaPredicted RBP6.47□□□□□ -1.37
SORT1-209ENST00000538502 SYT17Q9BSW7 474 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 CDCA4Q9BXL8 241 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 GALNT9Q9HCQ5 603 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 SLC39A9Q9NUM3 307 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 PCDHGA6Q9Y5G7 932 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 MGMTP16455 207 aa6.47□□□□□ -1.37
SORT1-209ENST00000538502 AADACP22760 399 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms