RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 HOXD1Q9GZZ0 328 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 PNO1Q9NRX1 252 aaKnown RBP12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ADAM18Q9Y3Q7 739 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 UNC13CQ8NB66 2214 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 RP1P56715 2156 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 HPGDSO60760 199 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 TMCC2O75069 709 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 SC5DO75845 299 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 OR7A10O76100 309 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 DDAH2O95865 285 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 TFP02787 698 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 BCKDHBP21953 392 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 TAS2R43P59537 309 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 SCN1BQ07699 218 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ASAH1Q13510 395 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.83□□□□□ -0.36
LIMK1-208ENST00000538333 PRAMEF17Q5VTA0 474 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 DPY19L2P2Q6ZN68 376 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 RFLNBQ8N5W9 214 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 GATSQ8NAP1 163 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 C17orf47Q8NEP4 570 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF721Q8TF20 911 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 CCNL2Q96S94 520 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-208ENST00000538333 PPP1R3EQ9H7J1 279 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 NRIP3Q9NQ35 241 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 SEMA5BQ9P283 1151 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 DHCR7Q9UBM7 475 aaKnown RBP12.83□□□□□ -0.36
LIMK1-208ENST00000538333 KLHL21Q9UJP4 597 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 MYO15AQ9UKN7 3530 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ARPC3O15145 178 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 NUDT21O43809 227 aaKnown RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 IGF2P01344 180 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ALAS2P22557 587 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 F8A1P23610 371 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ISXQ2M1V0 245 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 GXYLT1Q4G148 440 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 DMKNQ6E0U4 476 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 CNIH2Q6PI25 160 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ARL9Q6T311 187 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 CBLN3Q6UW01 205 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ATG4DQ86TL0 474 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 SLITRK4Q8IW52 837 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 TMEM151BQ8IW70 566 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF527Q8NB42 609 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 FAM98AQ8NCA5 519 aaKnown RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 NPEPL1Q8NDH3 523 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 OR1L3Q8NH93 324 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 DNASE2BQ8WZ79 361 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ADIPOR1Q96A54 375 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ZMYND19Q96E35 227 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 GPX7Q96SL4 187 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 EXOSC3Q9NQT5 275 aaKnown RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 NOX1Q9Y5S8 564 aa12.82□□□□□ -0.36
LIMK1-208ENST00000538333 ARID1BQ8NFD5 2236 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-208ENST00000538333 FRG2CA6NGY1 282 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 A8MUA0 341 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 J3QLW9 94 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 UBL4AP11441 157 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF19P17023 458 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 MST1P26927 711 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 CSF2RBP32927 897 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 RORAP35398 523 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 CASP3P42574 277 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 CAPZA2P47755 286 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 EVX1P49640 407 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 TRAM1Q15629 374 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 TAB1Q15750 504 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 METAP1DQ6UB28 335 aaPredicted RBP12.81□□□□□ -0.36
LIMK1-208ENST00000538333 RPTNQ6XPR3 784 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 D2HGDHQ8N465 521 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 SPEM1Q8N4L4 309 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 OR5J2Q8NH18 312 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 ZNRF4Q8WWF5 429 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF524Q96C55 264 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 CLIP3Q96DZ5 547 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 YIPF2Q9BWQ6 316 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 NMNAT2Q9BZQ4 307 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 OR8D2Q9GZM6 311 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 ST6GALNAC2Q9UJ37 374 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 UTS2O95399 124 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 HLA-DQB1P01920 261 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 GIMD1P0DJR0 217 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 APEX1P27695 318 aaKnown RBP12.81□□□□□ -0.36
LIMK1-208ENST00000538333 RIN1Q13671 783 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 PYDC2Q56P42 97 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 FAM27D1Q5T7N8 215 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 AGAP6Q5VW22 663 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 PXKQ7Z7A4 578 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 AKAP14Q86UN6 197 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 SLC35F3Q8IY50 421 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 SLC25A45Q8N413 288 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 POMGNT2Q8NAT1 580 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 PHOSPHO1Q8TCT1 267 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms