RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 EVPLLA8MZ36 301 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 THBDP07204 575 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 TFPIP10646 304 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 PRKAR1BP31321 381 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 OR3A2P47893 321 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 CDK6Q00534 326 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 GCNT6Q5T4J0 391 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 PAMR1Q6UXH9 720 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 RETREG3Q86VR2 466 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 MBD6Q96DN6 1003 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 ZHX1-C8orf76Q96EF9 292 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 CPPED1Q9BRF8 314 aaPredicted RBP15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 TMEM120AQ9BXJ8 343 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 POTEKPQ9BYX7 375 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 CACYBPQ9HB71 228 aaKnown RBP15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 MED4Q9NPJ6 270 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 ITGB1BP2Q9UKP3 347 aa15.27■□□□□ 0.04
SFSWAP-205ENST00000537164 PRRC2AP48634 2157 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 PRR14LQ5THK1 2151 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 RAI1Q7Z5J4 1906 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 ZNF814B7Z6K7 855 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 C5orf58C9J3I9 102 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 EIF1BO60739 113 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 CNOT4O95628 575 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 TROVE2P10155 538 aaKnown RBP eCLIP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 IMPDH2P12268 514 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 PRG2P13727 222 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 LOXP28300 417 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 COPZ1P61923 177 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 P2RY6Q15077 328 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 FBXW10Q5XX13 1052 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 CGB2Q6NT52 195 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 DHRS4L2Q6PKH6 230 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 Q6ZT83 130 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 SERPINA11Q86U17 422 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 NFKBIDQ8NI38 313 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 PIGXQ8TBF5 258 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 ANKRD27Q96NW4 1050 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 ZNF300Q96RE9 604 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 CGREF1Q99674 301 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 FOXC2Q99958 501 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 EMC3Q9P0I2 261 aa15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-205ENST00000537164 ZC3H12DA2A288 527 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 ANGPT2O15123 496 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 NPIPB7O75200 414 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 CXCR1P25024 350 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 SLC35A1P78382 337 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 SFRP5Q5T4F7 317 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 PAQR6Q6TCH4 344 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 GALNT5Q7Z7M9 940 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 DHDDSQ86SQ9 333 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 KRT73Q86Y46 540 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 LSMEM1Q8N8F7 131 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 STEAP2Q8NFT2 490 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 C3orf49Q96BT1 292 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 USB1Q9BQ65 265 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 SPATA5L1Q9BVQ7 753 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 ACTR6Q9GZN1 396 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 FGFR1OP2Q9NVK5 253 aa15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 C6orf203Q9P0P8 240 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-205ENST00000537164 ZNF469Q96JG9 3925 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 TMEM229AB2RXF0 380 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 GPR171O14626 319 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 KLF4O43474 513 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 ATP8B1O43520 1251 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 ATE1O95260 518 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 RAF1P04049 648 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 CCNA2P20248 432 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 SLC6A2P23975 617 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 DNASE1P24855 282 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 PCBP3P57721 371 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 RBBP4Q09028 425 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 ITGADQ13349 1161 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 SCARB2Q14108 478 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 POU4F3Q15319 338 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 HSP90B2PQ58FF3 399 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 ANKRD34AQ69YU3 496 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 NET1Q7Z628 596 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 ATG4DQ86TL0 474 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 CXorf67Q86X51 503 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 PTOV1Q86YD1 416 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 HIPK4Q8NE63 616 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 BHLHE22Q8NFJ8 381 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 KAT8Q9H7Z6 458 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 C12orf10Q9HB07 376 aa15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 CCM2LQ9NUG4 571 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-205ENST00000537164 LIPT2A6NK58 231 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 A8MVM7 634 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 FBP2O00757 339 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 RAMP1O60894 148 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 FZD7O75084 574 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 FPR1P21462 350 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 EDNRAP25101 427 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 NTF4P34130 210 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 ART1P52961 327 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 ARFIP2P53365 341 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 OR2B6P58173 313 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 GUCY1A3Q02108 690 aa15.23■□□□□ 0.03
SFSWAP-205ENST00000537164 COQ5Q5HYK3 327 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms