RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 GALNSP34059 522 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 CDK5Q00535 292 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 PLAURQ03405 335 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 CTF1Q16619 201 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 PDZK1Q5T2W1 519 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 H3F3CQ6NXT2 135 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 C16orf47Q6ZP98 133 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 MBOAT2Q6ZWT7 520 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 C16orf52Q8NHV5 167 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 TEX47Q8TBZ9 253 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 GRHL3Q8TE85 626 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 YIPF6Q96EC8 236 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 SIGLEC12Q96PQ1 595 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 TAAR6Q96RI8 345 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 HES7Q9BYE0 225 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 OR10A5Q9H207 317 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 CDCP1Q9H5V8 836 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 SLC25A19Q9HC21 320 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 TVP23BQ9NYZ1 205 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 CNOT2Q9NZN8 540 aaKnown RBP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 DNAJC27Q9NZQ0 273 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 MMACHCQ9Y4U1 282 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 SPTBN1Q01082 2364 aaKnown RBP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 C17orf105B2RV13 164 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 PRKYO43930 277 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 PIP5K1CO60331 668 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 FMO6PO60774 539 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF182P17025 639 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 FPR3P25089 353 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 GPR4P46093 362 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 PCYT1AP49585 367 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 SMSP52788 366 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 BIKQ13323 160 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 OR1Q1Q15612 314 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 NNATQ16517 81 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 SPINK14Q6IE38 97 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 ACSM5Q6NUN0 579 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 RASSF6Q6ZTQ3 369 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF614Q8N883 585 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF321PQ8N8H1 164 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 GALNT11Q8NCW6 608 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 POLDIP3Q9BY77 421 aaKnown RBP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 DSN1Q9H410 356 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 Q9N2J8 555 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 TESQ9UGI8 421 aaKnown RBP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 TEKT2Q9UIF3 430 aa10.89□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF223Q9UK11 482 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLIP1-208ENST00000537004 CRYBG3Q68DQ2 2970 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 EXPH5Q8NEV8 1989 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 OR5H15A6NDH6 313 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 KLF4O43474 513 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 PRKNO60260 465 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-208ENST00000537004 WISP2O76076 250 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 GABARAPO95166 117 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 CT45A8P0DMV1 189 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 CT45A9P0DMV2 189 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 PIPP12273 146 aaPredicted RBP10.88□□□□□ -0.67
CLIP1-208ENST00000537004 PTNP21246 168 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 DRD5P21918 477 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 CD96P40200 585 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 SLC15A1P46059 708 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 AQP6Q13520 282 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 IRF3Q14653 427 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 OCLNQ16625 522 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 CT45A2Q5DJT8 189 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 SLC27A4Q6P1M0 643 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 TUBA3EQ6PEY2 450 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 P2RY8Q86VZ1 359 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF615Q8N8J6 731 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 POGLUT1Q8NBL1 392 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 OR8D4Q8NGM9 314 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 CNOT9Q92600 299 aaKnown RBP10.88□□□□□ -0.67
CLIP1-208ENST00000537004 BCL7BQ9BQE9 202 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 PRSS27Q9BQR3 290 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 G6PC3Q9BUM1 346 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 CDCA4Q9BXL8 241 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 ITPAQ9BY32 194 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 KLHL1Q9NR64 748 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 CENPEQ02224 2701 aa10.88□□□□□ -0.67
CLIP1-208ENST00000537004 TRAV17A0A0B4J275 112 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 TRBV11-1A0A0K0K1C0 115 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 TLX2O43763 284 aaPredicted RBP10.87□□□□□ -0.67
CLIP1-208ENST00000537004 ATP6V1G1O75348 118 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 BCL10O95999 233 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 CLPSP04118 112 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 ADORA3P0DMS8 318 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 TGFBR2P37173 567 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 GPR143P51810 404 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 PMP22Q01453 160 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 DCTN2Q13561 401 aaKnown RBP10.87□□□□□ -0.67
CLIP1-208ENST00000537004 SPCS2Q15005 226 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 SLC25A30Q5SVS4 291 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 WDR88Q6ZMY6 472 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 BCDIN3DQ7Z5W3 292 aaKnown RBP10.87□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF554Q86TJ5 538 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 RPS19BP1Q86WX3 136 aaKnown RBP10.87□□□□□ -0.67
CLIP1-208ENST00000537004 FAM26EQ8N5C1 309 aa10.87□□□□□ -0.67
CLIP1-208ENST00000537004 PRR7Q8TB68 274 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms