RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 KCTD7Q96MP8 289 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 LMF1Q96S06 567 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 COQ7Q99807 217 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 SRRQ9GZT4 340 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 OR10A5Q9H207 317 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 FOLH1BQ9HBA9 442 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 DDX28Q9NUL7 540 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 DLL3Q9NYJ7 618 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 EXOGQ9Y2C4 368 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 SPIN1Q9Y657 262 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CLCA3PQ9Y6N3 262 aa11.88□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CPSF4LA6NMK7 179 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 SURF4O15260 269 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NDUFB5O43674 189 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 THY1P04216 161 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 TSPAN19P0C672 248 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 LIMS3P0CW19 117 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 LIMS4P0CW20 117 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 GABRA5P31644 462 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 DDOSTP39656 456 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 RNF144AP50876 292 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 GABREP78334 506 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PSG6Q00889 435 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 FUT7Q11130 342 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 EIF3IQ13347 325 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 GPR50Q13585 617 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 ZFP69Q49AA0 526 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 RRM2BQ7LG56 351 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 LSRQ86X29 649 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 ZNF615Q8N8J6 731 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 OR4N2Q8NGD1 307 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 ZNF721Q8TF20 911 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CT55Q8WUE5 264 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 UFD1Q92890 307 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 KIAA1143Q96AT1 154 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 VSTM2LQ96N03 204 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 MCHR1Q99705 422 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PRR14Q9BWN1 585 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 TEX12Q9BXU0 123 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 SPRY4Q9C004 299 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 FBXO34Q9NWN3 711 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PLEKHB1Q9UF11 243 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 GPN3Q9UHW5 284 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 ZNF443Q9Y2A4 671 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PTRH2Q9Y3E5 179 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CENPVL1A0A0U1RR11 272 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 C9J4A7 227 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 SLC30A4O14863 429 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 FCMRO60667 390 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PRAMEF2O60811 474 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 IGKV3-11P04433 115 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 THBS1P07996 1170 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 IFI6P09912 130 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 MAP3K8P41279 467 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 RFX3P48380 749 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 EMP2P54851 167 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 SLC37A1P57057 533 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NXNL2Q5VZ03 156 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 TYW3Q6IPR3 259 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 C6orf15Q6UXA7 325 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 GDF7Q7Z4P5 450 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 ZAR1Q86SH2 424 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NKAIN4Q8IVV8 208 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PLPP5Q8NEB5 264 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 OR4Q3Q8NH05 313 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 SLC41A3Q96GZ6 507 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 FAM46AQ96IP4 442 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PELOQ9BRX2 385 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 ZNF649Q9BS31 505 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NUDT9Q9BW91 350 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NRSN2Q9GZP1 204 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 MIXL1Q9H2W2 232 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 WDR54Q9H977 334 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 C14orf119Q9NWQ9 140 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CARD8Q9Y2G2 431 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 GSTK1Q9Y2Q3 226 aa11.87□□□□□ -0.51
CDK5RAP3-202ENST00000536708 LOC400499M0QZD8 3231 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NPIPA5A0A0B4J1W7 369 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 TRDV1A0A1B0GX56 115 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NPIPA7E9PJI5 369 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 MASP2O00187 686 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 RGS5O15539 181 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 FRS3O43559 492 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 IGHA1P01876 353 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 HMGN1P05114 100 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 NPIPA8P0DM63 369 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 RGS8P57771 180 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 CDK10Q15131 360 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PGGHGQ32M88 737 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 OR2G6Q5TZ20 316 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 FIGNL1Q6PIW4 674 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 XKRXQ6PP77 449 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PLEKHM3Q6ZWE6 761 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 LAX1Q8IWV1 398 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 C9orf40Q8IXQ3 194 aa11.86□□□□□ -0.51
CDK5RAP3-202ENST00000536708 PEX5LQ8IYB4 626 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms