RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 HSH2DQ96JZ2 352 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 ARL5BQ96KC2 179 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 SRXN1Q9BYN0 137 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 BATF3Q9NR55 127 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 RPS6KA6Q9UK32 745 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 ARHGAP21Q5T5U3 1957 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 USP9YO00507 2555 aaPredicted RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 NCOA6Q14686 2063 aaPredicted RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 A0A0G2JNJ9 132 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 SLC22A20A6NK97 555 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 ELOA3DA6NLF2 546 aaPredicted RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 ATP5HO75947 161 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 PRKD3O94806 890 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 LYPD3O95274 346 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 THY1P04216 161 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 PNMTP11086 282 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 CEACAM8P31997 349 aaPredicted RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 TIMP3P35625 211 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 CLK1P49759 484 aaKnown RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 CDH12P55289 794 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 MS4A2Q01362 244 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 MYBPHQ13203 477 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 TRIM25Q14258 630 aaKnown RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 PON3Q15166 354 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 ELOA3BQ3SY89 546 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 IFI44LQ53G44 452 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 ALG10BQ5I7T1 473 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 PDSS1Q5T2R2 415 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 RIPPLY2Q5TAB7 128 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 ZNF613Q6PF04 617 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 DEF8Q6ZN54 512 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 TMPPEQ6ZT21 453 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 FKBP9P1Q75LS8 142 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 EGFL6Q8IUX8 553 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 CCDC71Q8IV32 467 aaPredicted RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 ELOA3Q8NG57 546 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 ADAMTS16Q8TE57 1224 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 GEMIN6Q8WXD5 167 aaKnown RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 RND1Q92730 232 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 SLC38A4Q969I6 547 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 DDIT4LQ96D03 193 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 SLC47A1Q96FL8 570 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 NSMCE2Q96MF7 247 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 C12orf10Q9HB07 376 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 PAQR5Q9NXK6 330 aaPredicted RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 ACTR3BQ9P1U1 418 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 Q9UFV3 132 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 HDGFL3Q9Y3E1 203 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 ZNF175Q9Y473 711 aa10.81□□□□□ -0.68
CHD4-203ENST00000535717 SPTAN1Q13813 2472 aaKnown RBP10.81□□□□□ -0.68
CHD4-203ENST00000535717 SPTBN1Q01082 2364 aaKnown RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 IGKV1D-42A0A075B6H8 117 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 TRAPPC13A5PLN9 417 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 A8MVM7 634 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 SULT2B1O00204 365 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 GSC2O15499 205 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 NPIPB7O75200 414 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 DNAJC8O75937 253 aaPredicted RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 AQP8O94778 261 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 SYNGR4O95473 234 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 IFNW1P05000 195 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 IMPDH2P12268 514 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 KLK2P20151 261 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 ATP6V1B2P21281 511 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 DIO1P49895 249 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 SMSP52788 366 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 RAC3P60763 192 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 EGR4Q05215 589 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 ZNF239Q16600 458 aaKnown RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 PPP4R4Q6NUP7 873 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 PGM2L1Q6PCE3 622 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 CYP2R1Q6VVX0 501 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 LINC00114Q6XXX2 140 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 CCDC121Q6ZUS5 278 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 P4HA3Q7Z4N8 544 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 TSEN54Q7Z6J9 526 aaKnown RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 P3H2Q8IVL5 708 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 NAXEQ8NCW5 288 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 RNF217Q8TC41 542 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 SSC4DQ8WTU2 575 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 ITLN2Q8WWU7 325 aaPredicted RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 ROBO4Q8WZ75 1007 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 CPNE4Q96A23 557 aaPredicted RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 CCDC124Q96CT7 223 aaKnown RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 DOCK7Q96N67 2140 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 TM9SF2Q99805 663 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 CADM1Q9BY67 442 aaKnown RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 POTEKPQ9BYX7 375 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 AMBRA1Q9C0C7 1298 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 MUC13Q9H3R2 512 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 TIGARQ9NQ88 270 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 SELENONQ9NZV5 590 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 MCTS1Q9ULC4 181 aaKnown RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 SLC7A7Q9UM01 511 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 SAMD4AQ9UPU9 718 aaKnown RBP10.8□□□□□ -0.68
CHD4-203ENST00000535717 RNF6Q9Y252 685 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 V9GYQ6 96 aa10.8□□□□□ -0.68
CHD4-203ENST00000535717 MED12LQ86YW9 2145 aa10.79□□□□□ -0.68
CHD4-203ENST00000535717 A0A087WUJ7 227 aa10.79□□□□□ -0.68
CHD4-203ENST00000535717 IGHV3-15A0A0B4J1V0 119 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms