RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 SLC17A5Q9NRA2 495 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 POLE3Q9NRF9 147 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 PARPBPQ9NWS1 579 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 TMEM181Q9P2C4 612 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 UPB1Q9UBR1 384 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 AMDHD2Q9Y303 409 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 WDR45Q9Y484 360 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 RNASET2O00584 256 aaKnown RBP12.16□□□□□ -0.46
CCDC84-208ENST00000534656 GZMKP49863 264 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 PHC1P78364 1004 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 KCNJ10P78508 379 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 SLC25A3Q00325 362 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 EMX2Q04743 252 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 C1QTNF12Q5T7M4 302 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 ATAD3BQ5T9A4 648 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 C9orf135Q5VTT2 229 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 EMBQ6PCB8 327 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 FRRS1Q6ZNA5 592 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 ARFGAP2Q8N6H7 521 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 ARIH2OSQ8N7S6 290 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 OR4A15Q8NGL6 344 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 ZG16BQ96DA0 208 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
CCDC84-208ENST00000534656 SLC7A10Q9NS82 523 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.16□□□□□ -0.46
CCDC84-208ENST00000534656 ASIC5Q9NY37 505 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 NOP53Q9NZM5 478 aaKnown RBP12.16□□□□□ -0.46
CCDC84-208ENST00000534656 PCDHGB4Q9UN71 923 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 SLC9A8Q9Y2E8 581 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 FLVCR1Q9Y5Y0 555 aa12.16□□□□□ -0.46
CCDC84-208ENST00000534656 YLPM1P49750 1951 aaKnown RBP12.16□□□□□ -0.46
CCDC84-208ENST00000534656 TLDC2A0PJX2 215 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 VWC2LB2RUY7 222 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 EIF1BO60739 113 aaKnown RBP12.15□□□□□ -0.46
CCDC84-208ENST00000534656 LY6HO94772 140 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 CCNA2P20248 432 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 UQCRC2P22695 453 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 HTR3AP46098 478 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 IDH2P48735 452 aaKnown RBP12.15□□□□□ -0.46
CCDC84-208ENST00000534656 SLC35A1P78382 337 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 TGFBR3Q03167 851 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 PLAURQ03405 335 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 FUT5Q11128 374 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 SLC17A1Q14916 467 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 SWI5Q1ZZU3 235 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 SMU1Q2TAY7 513 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 MST1LQ2TV78 715 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 TSPO2Q5TGU0 170 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 TNFAIP8L2Q6P589 184 aaPredicted RBP12.15□□□□□ -0.46
CCDC84-208ENST00000534656 OR8J2Q8NGG1 315 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 PMM1Q92871 262 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 RAB8BQ92930 207 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 ROPN1LQ96C74 230 aa12.15□□□□□ -0.46
CCDC84-208ENST00000534656 NAA11Q9BSU3 229 aaPredicted RBP12.15□□□□□ -0.46
CCDC84-208ENST00000534656 TMED7-TICAM2A0A0A6YYA0 188 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 CLDN24A6NM45 220 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 NDUFS8O00217 210 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 SCN2BO60939 215 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 SPAG7O75391 227 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 WNT11O96014 354 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 IMPDH2P12268 514 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 SRD5A1P18405 259 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 IGFBP5P24593 272 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 MPGP29372 298 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 PDLIM4P50479 330 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 PRPS1P60891 318 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 SAXO2Q658L1 398 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 FAM166AQ6J272 317 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 TCP10LQ8TDR4 215 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 CNOT9Q92600 299 aaKnown RBP12.14□□□□□ -0.47
CCDC84-208ENST00000534656 DDIT4LQ96D03 193 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 FBXO17Q96EF6 278 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 C19orf24Q9BVV8 132 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 OSGIN1Q9UJX0 560 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 KCNS2Q9ULS6 477 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 MOKQ9UQ07 419 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 TMED7Q9Y3B3 224 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 FKBP7Q9Y680 259 aa12.14□□□□□ -0.47
CCDC84-208ENST00000534656 NUP214P35658 2090 aaPredicted RBP12.14□□□□□ -0.47
CCDC84-208ENST00000534656 ALPK2Q86TB3 2170 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 LOC100289279A0A1B0GTE1 492 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 PRSS51A0A1B0GVH4 220 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 TMEM72A0PK05 275 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 PRAMEF27A3QJZ7 478 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 SLC35F4A4IF30 521 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 ZNF208O43345 1280 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 CPSF4O95639 269 aaKnown RBP12.13□□□□□ -0.47
CCDC84-208ENST00000534656 C8BP07358 591 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 NR4A2P43354 598 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 KHKP50053 298 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 POLR2HP52434 150 aaKnown RBP12.13□□□□□ -0.47
CCDC84-208ENST00000534656 MAP2K6P52564 334 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 GGTLC2Q14390 218 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 GPAT3Q53EU6 434 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 FAM120AOSQ5T036 256 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 ANXA8L1Q5VT79 327 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 HMGN2P46Q86SG4 172 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 ANKRD46Q86W74 232 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 RIBC1Q8N443 379 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms