RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 C17orf78Q8N4C9 275 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 C1orf162Q8NEQ5 155 aaPredicted RBP18.66■□□□□ 0.58
SSH3-211ENST00000534112 MIPOL1Q8TD10 442 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 SLC35G5Q96KT7 338 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 OR51I1Q9H343 314 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 CHODLQ9H9P2 273 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 SLC7A10Q9NS82 523 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 PARPBPQ9NWS1 579 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 TMEM181Q9P2C4 612 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 UPB1Q9UBR1 384 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 TRAPPC4Q9Y296 219 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 AMDHD2Q9Y303 409 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 MALRD1Q5VYJ5 2156 aa18.66■□□□□ 0.58
SSH3-211ENST00000534112 LOC100289279A0A1B0GTE1 492 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 ATP6V1G2-DDX39BF2Z307 99 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 HAX1O00165 279 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 GUSBP08236 651 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 CCNA2P20248 432 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 PDLIM4P50479 330 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 TGFBR3Q03167 851 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 GGTLC2Q14390 218 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 SWI5Q1ZZU3 235 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 AP1ARQ63HQ0 302 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 TYW3Q6IPR3 259 aaKnown RBP18.65■□□□□ 0.58
SSH3-211ENST00000534112 EMBQ6PCB8 327 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 IL17RELQ6ZVW7 336 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 UBLCP1Q8WVY7 318 aaPredicted RBP18.65■□□□□ 0.58
SSH3-211ENST00000534112 XAGE5Q8WWM1 108 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 OIT3Q8WWZ8 545 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 ZG16BQ96DA0 208 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 MSI2Q96DH6 328 aaKnown RBP18.65■□□□□ 0.58
SSH3-211ENST00000534112 FBXO17Q96EF6 278 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 WDR45Q9Y484 360 aa18.65■□□□□ 0.58
SSH3-211ENST00000534112 SKAP2O75563 359 aaPredicted RBP18.64■□□□□ 0.57
SSH3-211ENST00000534112 OR12D1P0DN82 309 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 ARRB2P32121 409 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 NR4A2P43354 598 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 CLDN8P56748 225 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 C1QTNF12Q5T7M4 302 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 ATAD3BQ5T9A4 648 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 TSPO2Q5TGU0 170 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 OR4F3Q6IEY1 312 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 ZCCHC23Q6ZST2 131 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 TUBGCP3Q96CW5 907 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 PRR14Q9BWN1 585 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 SAP130Q9H0E3 1048 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 POLE3Q9NRF9 147 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 MKS1Q9NXB0 559 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 ZDHHC2Q9UIJ5 367 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 MOKQ9UQ07 419 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 SLC9A8Q9Y2E8 581 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 FLVCR1Q9Y5Y0 555 aa18.64■□□□□ 0.57
SSH3-211ENST00000534112 NDUFS8O00217 210 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 RNASET2O00584 256 aaKnown RBP18.63■□□□□ 0.57
SSH3-211ENST00000534112 EIF1BO60739 113 aaKnown RBP18.63■□□□□ 0.57
SSH3-211ENST00000534112 AGR2O95994 175 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 IDH2P48735 452 aaKnown RBP18.63■□□□□ 0.57
SSH3-211ENST00000534112 PRPS1P60891 318 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 SLC35A1P78382 337 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 KCNJ10P78508 379 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 PLAURQ03405 335 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 SLC17A1Q14916 467 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 HMGN2P46Q86SG4 172 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 ARFGAP2Q8N6H7 521 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 RAB8BQ92930 207 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 APOPT1Q96IL0 206 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 SORCS2Q96PQ0 1159 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 PIMREGQ9BSJ6 248 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 HEATR1Q9H583 2144 aaKnown RBP18.63■□□□□ 0.57
SSH3-211ENST00000534112 EXOSC3Q9NQT5 275 aaKnown RBP18.63■□□□□ 0.57
SSH3-211ENST00000534112 SLC17A7Q9P2U7 560 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 FKBP7Q9Y680 259 aa18.63■□□□□ 0.57
SSH3-211ENST00000534112 CLDN24A6NM45 220 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 APEHP13798 732 aaKnown RBP18.62■□□□□ 0.57
SSH3-211ENST00000534112 MPGP29372 298 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 HTR3AP46098 478 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 EMX2Q04743 252 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 FUT5Q11128 374 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 TNFAIP8L2Q6P589 184 aaPredicted RBP18.62■□□□□ 0.57
SSH3-211ENST00000534112 FRRS1Q6ZNA5 592 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 LSRQ86X29 649 aaPredicted RBP18.62■□□□□ 0.57
SSH3-211ENST00000534112 OR4A15Q8NGL6 344 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 ROPN1LQ96C74 230 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 FOXN4Q96NZ1 517 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 NAA11Q9BSU3 229 aaPredicted RBP18.62■□□□□ 0.57
SSH3-211ENST00000534112 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.62■□□□□ 0.57
SSH3-211ENST00000534112 PCDHGB4Q9UN71 923 aa18.62■□□□□ 0.57
SSH3-211ENST00000534112 TMED7-TICAM2A0A0A6YYA0 188 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 IGHV4-61A0A0C4DH41 118 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 WNT11O96014 354 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 IMPDH2P12268 514 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 HNF1AP20823 631 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 SERPINB5P36952 375 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 MAD2L1Q13257 205 aaPredicted RBP18.61■□□□□ 0.57
SSH3-211ENST00000534112 EIF1ADQ8N9N8 165 aaKnown RBP18.61■□□□□ 0.57
SSH3-211ENST00000534112 CNOT9Q92600 299 aaKnown RBP18.61■□□□□ 0.57
SSH3-211ENST00000534112 PMM1Q92871 262 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 C3orf49Q96BT1 292 aa18.61■□□□□ 0.57
SSH3-211ENST00000534112 NOP53Q9NZM5 478 aaKnown RBP18.61■□□□□ 0.57
SSH3-211ENST00000534112 OSGIN1Q9UJX0 560 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms