RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GRINAQ7Z429 371 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 MTDHQ86UE4 582 aaKnown RBP8.5□□□□□ -1.05
SSBP3-215ENST00000533946 RBM45Q8IUH3 476 aaKnown RBP8.5□□□□□ -1.05
SSBP3-215ENST00000533946 GLB1L3Q8NCI6 653 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-215ENST00000533946 OR4D11Q8NGI4 311 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 NINJ1Q92982 152 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 SPDL1Q96EA4 605 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 PERPQ96FX8 193 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 TMEM204Q9BSN7 226 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 EXOSC3Q9NQT5 275 aaKnown RBP8.5□□□□□ -1.05
SSBP3-215ENST00000533946 POLE3Q9NRF9 147 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 SLC35A3Q9Y2D2 325 aa8.5□□□□□ -1.05
SSBP3-215ENST00000533946 IGKV1D-42A0A075B6H8 117 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 IGKV3D-15A0A087WSY6 115 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 A0A096LPI6 279 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 CFAP73A6NFT4 308 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 LRRN3E7EW58 273 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 FBP2O00757 339 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 POLR3GO15318 223 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 PGM3O95394 542 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 DBIP07108 87 aaKnown RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 ITGA5P08648 1049 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 CBLP22681 906 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 PEX19P40855 299 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 APOBEC1P41238 236 aaKnown RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 SLC1A3P43003 542 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 PCYT1AP49585 367 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 CRYBA2P53672 197 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 NKX6-1P78426 367 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 HPCAP84074 193 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 LTBQ06643 244 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 BSPH1Q075Z2 132 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 DMTNQ08495 405 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 RNPS1Q15287 305 aaKnown RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 OR7A5Q15622 319 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 STK11Q15831 433 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 PDSS1Q5T2R2 415 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 LRIF1Q5T3J3 769 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 TSPO2Q5TGU0 170 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 EEF1A1P5Q5VTE0 462 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 ADAM5Q6NVV9 412 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 B3GLCTQ6Y288 498 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 BEND4Q6ZU67 534 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 BHLHA15Q7RTS1 189 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 PTOV1Q86YD1 416 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF433Q8N7K0 673 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 WDR31Q8NA23 367 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 MAPK1IP1LQ8NDC0 245 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 AKAP1Q92667 903 aaKnown RBP eCLIP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 HTRA1Q92743 480 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 C3orf49Q96BT1 292 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 DTNBP1Q96EV8 351 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 ALPK1Q96QP1 1244 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 CPPED1Q9BRF8 314 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 PTDSS2Q9BVG9 487 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 HEATR1Q9H583 2144 aaKnown RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 PIF1Q9H611 641 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 NPHS2Q9NP85 383 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 SLC7A10Q9NS82 523 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 INTS9Q9NV88 658 aaKnown RBP8.49□□□□□ -1.05
SSBP3-215ENST00000533946 LIPT1Q9Y234 373 aa8.49□□□□□ -1.05
SSBP3-215ENST00000533946 CR1P17927 2039 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 LIPT2A6NK58 231 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF724A8MTY0 619 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 PDLIM1O00151 329 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 CLOCKO15516 846 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 EDF1O60869 148 aaKnown RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 NPIPB7O75200 414 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 RAD51DO75771 328 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 KRT75O95678 551 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 PMS2P2O95744 297 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 AGR2O95994 175 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 CD8AP01732 235 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 OPN1SWP03999 348 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 THY1P04216 161 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 ARAFP10398 606 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 BMP2P12643 396 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 NCF2P19878 526 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 CDKN1AP38936 164 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 MRPL19P49406 292 aaKnown RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 POLR2HP52434 150 aaKnown RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 MTPNP58546 118 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 FAPQ12884 760 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 PGGHGQ32M88 737 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 Q5PR19 223 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 NCMAPQ5T1S8 102 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 Q6ZT83 130 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 HDXQ7Z353 690 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 GALNT5Q7Z7M9 940 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 HOMEZQ8IX15 550 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 TRIML2Q8N7C3 387 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 SMYD1Q8NB12 490 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 OR52N5Q8NH56 324 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 TMEM234Q8WY98 164 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF837Q96EG3 531 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 KTI12Q96EK9 354 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 REXO5Q96IC2 774 aaKnown RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 Q96MF0 132 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms