RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ADGRG5Q8IZF4 528 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 OR52J3Q8NH60 311 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 OR10D3Q8NH80 312 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 OSTF1Q92882 214 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 POP5Q969H6 163 aaKnown RBP15.7■□□□□ 0.1
NXF1-216ENST00000533499 SLC38A4Q969I6 547 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 SLC25A36Q96CQ1 311 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 ZNF845Q96IR2 970 aaPredicted RBP15.7■□□□□ 0.1
NXF1-216ENST00000533499 ARL5BQ96KC2 179 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 C7orf34Q96L11 122 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 PIP5K1AQ99755 562 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 TUBA1CQ9BQE3 449 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 POLR2J2Q9GZM3 115 aaKnown RBP15.7■□□□□ 0.1
NXF1-216ENST00000533499 PRDM14Q9GZV8 571 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 POLR2J3Q9H1A7 115 aaKnown RBP15.7■□□□□ 0.1
NXF1-216ENST00000533499 TP63Q9H3D4 680 aaPredicted RBP15.7■□□□□ 0.1
NXF1-216ENST00000533499 MAGIXQ9H6Y5 334 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 PRDM4Q9UKN5 801 aa15.7■□□□□ 0.1
NXF1-216ENST00000533499 CLCA1A8K7I4 914 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 ZNF208O43345 1280 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 SYNGR4O95473 234 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 THY1P04216 161 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 SEMG1P04279 462 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 H1F0P07305 194 aaKnown RBP15.69■□□□□ 0.1
NXF1-216ENST00000533499 RAP2AP10114 183 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 CBLP22681 906 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 IDUAP35475 653 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 MYBPHQ13203 477 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 CCNIQ14094 377 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 KPNB1Q14974 876 aaKnown RBP15.69■□□□□ 0.1
NXF1-216ENST00000533499 TRAM2Q15035 370 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 SF3B4Q15427 424 aaKnown RBP eCLIP15.69■□□□□ 0.16e-7■■■□□ 16.5
NXF1-216ENST00000533499 EMC4Q5J8M3 183 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 SWT1Q5T5J6 900 aaKnown RBP15.69■□□□□ 0.1
NXF1-216ENST00000533499 C1orf185Q5T7R7 199 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 C1orf140Q5VVS0 124 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 NKAIN4Q8IVV8 208 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 CHID1Q9BWS9 393 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 TAPBPLQ9BX59 468 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 C12orf10Q9HB07 376 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 IL1RAPQ9NPH3 570 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 TIGARQ9NQ88 270 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 ZNF835Q9Y2P0 537 aa15.69■□□□□ 0.1
NXF1-216ENST00000533499 A0A087WUJ7 227 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 TCRBV3S1A0A5B6 114 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 AHRRA9YTQ3 701 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 CCL21O00585 134 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 GNGT2O14610 69 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 FFAR1O14842 300 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 WDR1O75083 606 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 GABRA1P14867 456 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 ACVR2AP27037 513 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 GTF2E2P29084 291 aaKnown RBP15.68■□□□□ 0.1
NXF1-216ENST00000533499 RPS5P46782 204 aaKnown RBP15.68■□□□□ 0.1
NXF1-216ENST00000533499 DIO1P49895 249 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 OR7A5Q15622 319 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 RPTNQ6XPR3 784 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 WDR88Q6ZMY6 472 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 RRM2BQ7LG56 351 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 TSEN54Q7Z6J9 526 aaKnown RBP15.68■□□□□ 0.1
NXF1-216ENST00000533499 OFCC1Q8IZS5 231 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 TMEM255BQ8WV15 326 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 MPP4Q96JB8 637 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 ZNF347Q96SE7 839 aa15.68■□□□□ 0.1
NXF1-216ENST00000533499 NMNAT1Q9HAN9 279 aaPredicted RBP15.68■□□□□ 0.1
NXF1-216ENST00000533499 C6orf203Q9P0P8 240 aaPredicted RBP15.68■□□□□ 0.1
NXF1-216ENST00000533499 IGHV3-15A0A0B4J1V0 119 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 LYPD3O95274 346 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 THRBP10828 461 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 FKBP2P26885 142 aaKnown RBP15.67■□□□□ 0.1
NXF1-216ENST00000533499 RRM2P31350 389 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 CLK1P49759 484 aaKnown RBP15.67■□□□□ 0.1
NXF1-216ENST00000533499 MAP2K6P52564 334 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 CSNK2A1P68400 391 aaPredicted RBP15.67■□□□□ 0.1
NXF1-216ENST00000533499 PON3Q15166 354 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 CTU2Q2VPK5 515 aaKnown RBP15.67■□□□□ 0.1
NXF1-216ENST00000533499 ACSF3Q4G176 576 aaPredicted RBP15.67■□□□□ 0.1
NXF1-216ENST00000533499 ZNF730Q6ZMV8 503 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 TMPPEQ6ZT21 453 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 FJX1Q86VR8 437 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 STK35Q8TDR2 534 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 TMEM239Q8WW34 195 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 ROBO4Q8WZ75 1007 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 ZHX1-C8orf76Q96EF9 292 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 KTI12Q96EK9 354 aaPredicted RBP15.67■□□□□ 0.1
NXF1-216ENST00000533499 EPYCQ99645 322 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 PRSS27Q9BQR3 290 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 SRXN1Q9BYN0 137 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 YY1AP1Q9H869 796 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 COQ10BQ9H8M1 238 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 MCTS1Q9ULC4 181 aaKnown RBP15.67■□□□□ 0.1
NXF1-216ENST00000533499 HDGFL3Q9Y3E1 203 aa15.67■□□□□ 0.1
NXF1-216ENST00000533499 IGKV1D-42A0A075B6H8 117 aa15.66■□□□□ 0.1
NXF1-216ENST00000533499 TRAV36DV7A0A075B6V5 113 aa15.66■□□□□ 0.1
NXF1-216ENST00000533499 SLC22A20A6NK97 555 aa15.66■□□□□ 0.1
NXF1-216ENST00000533499 KDM4EB2RXH2 506 aaPredicted RBP15.66■□□□□ 0.1
NXF1-216ENST00000533499 ADAMDEC1O15204 470 aa15.66■□□□□ 0.1
NXF1-216ENST00000533499 PIP5K1CO60331 668 aa15.66■□□□□ 0.1
NXF1-216ENST00000533499 FKBP6O75344 327 aa15.66■□□□□ 0.1
NXF1-216ENST00000533499 GADD45GO95257 159 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms