RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 IST1P53990 364 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 CSNK2A1P68400 391 aaPredicted RBP13.77□□□□□ -0.21
CTSB-225ENST00000532409 NFYCQ13952 458 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 SCARB2Q14108 478 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 HSP90B2PQ58FF3 399 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 PRAMEF8Q5VWM4 474 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 PRAMEF7Q5VXH5 474 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 REEP3Q6NUK4 255 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 MTDHQ86UE4 582 aaKnown RBP13.77□□□□□ -0.21
CTSB-225ENST00000532409 PTOV1Q86YD1 416 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 ZNF440Q8IYI8 595 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 GABRG1Q8N1C3 465 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 SLC43A2Q8N370 569 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 DPP10Q8N608 796 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 CGREF1Q99674 301 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 WFDC6Q9BQY6 131 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 PLEKHF2Q9H8W4 249 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 ST6GALNAC2Q9UJ37 374 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 ZNF232Q9UNY5 417 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 HDGFL3Q9Y3E1 203 aa13.77□□□□□ -0.21
CTSB-225ENST00000532409 MAP1AP78559 2803 aaPredicted RBP13.77□□□□□ -0.21
CTSB-225ENST00000532409 ZNF716A6NP11 495 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 EVPLLA8MZ36 301 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 ZNF208O43345 1280 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 IGHV3-9P01782 118 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 UQCRBP14927 111 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 ETS2P15036 469 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 FPR1P21462 350 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 CRYGSP22914 178 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 HTR2AP28223 471 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 TESK1Q15569 626 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 METTL21CQ5VZV1 264 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 WBP2NLQ6ICG8 309 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 BEND4Q6ZU67 534 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 STK32CQ86UX6 486 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 PIK3IP1Q96FE7 263 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 ACTR6Q9GZN1 396 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 TMEM38AQ9H6F2 299 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 CACYBPQ9HB71 228 aaKnown RBP13.76□□□□□ -0.21
CTSB-225ENST00000532409 GP6Q9HCN6 339 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 CCM2LQ9NUG4 571 aaPredicted RBP13.76□□□□□ -0.21
CTSB-225ENST00000532409 TMEM181Q9P2C4 612 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 IFT52Q9Y366 437 aa13.76□□□□□ -0.21
CTSB-225ENST00000532409 PRRC2AP48634 2157 aaKnown RBP13.76□□□□□ -0.21
CTSB-225ENST00000532409 ADAP00813 363 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 SLC6A2P23975 617 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 CXCR1P25024 350 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 LOXP28300 417 aaPredicted RBP13.75□□□□□ -0.21
CTSB-225ENST00000532409 OR3A2P47893 321 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 ART1P52961 327 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 COPZ1P61923 177 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 H3F3AP84243 136 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 DMTNQ08495 405 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 KLF10Q13118 480 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 CEACAM7Q14002 265 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 C3orf49Q96BT1 292 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 S100PBPQ96BU1 408 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 DDIT4LQ96D03 193 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 PIF1Q9H611 641 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 CCDC134Q9H6E4 229 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 MED4Q9NPJ6 270 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 ZNF226Q9NYT6 803 aa13.75□□□□□ -0.21
CTSB-225ENST00000532409 IGKV3D-15A0A087WSY6 115 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 FXYD1O00168 92 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 OPN1SWP03999 348 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 PSMB1P20618 241 aaKnown RBP13.74□□□□□ -0.21
CTSB-225ENST00000532409 ADSLP30566 484 aaPredicted RBP13.74□□□□□ -0.21
CTSB-225ENST00000532409 PRKAR1BP31321 381 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 MDH1P40925 334 aaKnown RBP13.74□□□□□ -0.21
CTSB-225ENST00000532409 CLK1P49759 484 aaKnown RBP13.74□□□□□ -0.21
CTSB-225ENST00000532409 OR7A5Q15622 319 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 CYP51A1Q16850 503 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 PAMR1Q6UXH9 720 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 GALNT5Q7Z7M9 940 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 ATG4DQ86TL0 474 aaPredicted RBP13.74□□□□□ -0.21
CTSB-225ENST00000532409 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 WFDC8Q8IUA0 241 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 SMYD1Q8NB12 490 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 ZHX1-C8orf76Q96EF9 292 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 ZNF317Q96PQ6 595 aaPredicted RBP13.74□□□□□ -0.21
CTSB-225ENST00000532409 ARMCX1Q9P291 453 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 CORO2BQ9UQ03 480 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 TRAPPC4Q9Y296 219 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 ITPR3Q14573 2671 aa13.74□□□□□ -0.21
CTSB-225ENST00000532409 LIPT2A6NK58 231 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 TMEM229AB2RXF0 380 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 KLF4O43474 513 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 LYZL6O75951 148 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 AKR7A3O95154 331 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 IDUAP35475 653 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 GZMMP51124 257 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 SLC35A1P78382 337 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 ZSWIM7Q19AV6 140 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 RABL3Q5HYI8 236 aa13.73□□□□□ -0.21
CTSB-225ENST00000532409 SFRP5Q5T4F7 317 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms