RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 KRTAP1-1Q07627 177 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 LRRC74AQ0VAA2 488 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 FAPQ12884 760 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 VEZF1Q14119 521 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 HHATQ5VTY9 493 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 WDR60Q8WVS4 1066 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 PMM1Q92871 262 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 TRAF4Q9BUZ4 470 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-205ENST00000531042 GRIP2Q9C0E4 1043 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 WDR55Q9H6Y2 383 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-205ENST00000531042 MTHFD2LQ9H903 347 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-205ENST00000531042 ASB6Q9NWX5 421 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 TMEM181Q9P2C4 612 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 OSGIN1Q9UJX0 560 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 TMED7Q9Y3B3 224 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 CIB4A0PJX0 185 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 TMEM72A0PK05 275 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 CCT8L1PA6NM43 557 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 FAAHO00519 579 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 HDAC3O15379 428 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 ZNF208O43345 1280 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 IGHV4-39P01824 125 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 GSNP06396 782 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 IMPDH2P12268 514 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 EPHA3P29320 983 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 SLC1A3P43003 542 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 POLR2HP52434 150 aaKnown RBP13.9□□□□□ -0.18
CPSF1-205ENST00000531042 CDH11P55287 796 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 WDR4P57081 412 aaKnown RBP13.9□□□□□ -0.18
CPSF1-205ENST00000531042 COX20Q5RI15 118 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 CROCCP2Q86T23 111 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 DTX2Q86UW9 622 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 ANKRD42Q8N9B4 389 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 MAPK1IP1LQ8NDC0 245 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 OR52N5Q8NH56 324 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 PNPT1Q8TCS8 783 aaKnown RBP13.9□□□□□ -0.18
CPSF1-205ENST00000531042 DDIT4LQ96D03 193 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 REG4Q9BYZ8 158 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 SLCO5A1Q9H2Y9 848 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 ALG2Q9H553 416 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 FAIMQ9NVQ4 179 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 THAP1Q9NVV9 213 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 MALT1Q9UDY8 824 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 SLC25A15Q9Y619 301 aa13.9□□□□□ -0.18
CPSF1-205ENST00000531042 TRPC5OSA6NMA1 111 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 EIF1BO60739 113 aaKnown RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 NDUFS7O75251 213 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 SNNO75324 88 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 DBIP07108 87 aaKnown RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 NR2F1P10589 423 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 IL7RP16871 459 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 TACR3P29371 465 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 ACVR1BP36896 505 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 MAP2K6P52564 334 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 FOXG1P55316 489 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 SLC35A1P78382 337 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 EPS8Q12929 822 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 GNA13Q14344 377 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 MAPK11Q15759 364 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 GABRA6Q16445 453 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 MRPL2Q5T653 305 aaKnown RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 TMEM108Q6UXF1 575 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 DNM1P46Q6ZS02 220 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 LSRQ86X29 649 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 GLB1L3Q8NCI6 653 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 RADILQ96JH8 1075 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 MUS81Q96NY9 551 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 ZBTB18Q99592 522 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 NAA11Q9BSU3 229 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 TAS2R16Q9NYV7 291 aa13.89□□□□□ -0.19
CPSF1-205ENST00000531042 GDF2Q9UK05 429 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-205ENST00000531042 CR1P17927 2039 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 ZC3H12DA2A288 527 aaKnown RBP13.88□□□□□ -0.19
CPSF1-205ENST00000531042 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 KIAA1324LA8MWY0 1029 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-205ENST00000531042 PDLIM1O00151 329 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 RFXANKO14593 260 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 KRT75O95678 551 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 ITGA5P08648 1049 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 KITP10721 976 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 PTAFRP25105 342 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 ZNF83P51522 516 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 SLC17A1Q14916 467 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 OR7E24Q6IFN5 339 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 KLHL17Q6TDP4 642 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 CASP12Q6UXS9 341 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 PEX5LQ8IYB4 626 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-205ENST00000531042 OR52E4Q8NGH9 312 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 ADAM19Q9H013 955 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 SLC6A13Q9NSD5 602 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 PARPBPQ9NWS1 579 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 MGAT4BQ9UQ53 548 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 SLC9A8Q9Y2E8 581 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 FLVCR1Q9Y5Y0 555 aa13.88□□□□□ -0.19
CPSF1-205ENST00000531042 A0A1W2PR80 420 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 TMEM120BA0PK00 339 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 CDHR4A6H8M9 788 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 E7EQL1 145 aa13.87□□□□□ -0.19
CPSF1-205ENST00000531042 SLCO1B7G3V0H7 640 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms