RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SMYD1Q8NB12 490 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 OR6K3Q8NGY3 331 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 ABHD3Q8WU67 409 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 C3orf49Q96BT1 292 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 DDIT4LQ96D03 193 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 CCT8L2Q96SF2 557 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 HOPXQ9BPY8 73 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 POTEKPQ9BYX7 375 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 SLC24A3Q9HC58 644 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 GP6Q9HCN6 339 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 CMTM6Q9NX76 183 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 KLHL28Q9NXS3 571 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 TMEM181Q9P2C4 612 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 USP22Q9UPT9 525 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 AP3M1Q9Y2T2 418 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 EMC9Q9Y3B6 208 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 IGHV3-15A0A0B4J1V0 119 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 ZC3H12DA2A288 527 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 CCT8L1PA6NM43 557 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 SMAD9O15198 467 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 DNPH1O43598 174 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 CYTIPO60759 359 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 LGI1O95970 557 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 OPN1SWP03999 348 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 IMPDH2P12268 514 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 KLK2P20151 261 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 HTR2AP28223 471 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 AGTR1P30556 359 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 CPA2P48052 419 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 PCYT1AP49585 367 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 CRYBA2P53672 197 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 SNTB1Q13884 538 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 ZNF474Q6S9Z5 364 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 SLC15A3Q8IY34 581 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 ZNF610Q8N9Z0 462 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 GPR32P1Q8NGA4 272 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 OR52E4Q8NGH9 312 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 TAMM41Q96BW9 452 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 WFDC6Q9BQY6 131 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 TRIM2Q9C040 744 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 OPN3Q9H1Y3 402 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 GALNT8Q9NY28 637 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 KCNN3Q9UGI6 736 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 TESQ9UGI8 421 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 PROCRQ9UNN8 238 aa11.3□□□□□ -0.6
CCDC90B-216ENST00000529856 A0A1B0GWA3 101 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 A8MVM7 634 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 FAM220BPB1ANY3 271 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 TMEM229AB2RXF0 380 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 TPST2O60704 377 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 FESP07332 822 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 YES1P07947 543 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 CD247P20963 164 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 KIR2DL3P43628 341 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 RGS8P57771 180 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 OR2B6P58173 313 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 SLC35A1P78382 337 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 H3F3AP84243 136 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 SORDQ00796 357 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 BNIP2Q12982 314 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 NRF1Q16656 503 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 TMEM201Q5SNT2 666 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 C6orf89Q6UWU4 347 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 LSRQ86X29 649 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 TUSC5Q8IXB3 177 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 MICU2Q8IYU8 434 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 OR2T12Q8NG77 320 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 STK35Q8TDR2 534 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 SLC26A7Q8TE54 656 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 DNAJA4Q8WW22 397 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 RASSF5Q8WWW0 418 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 ZHX1-C8orf76Q96EF9 292 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 DNAJA3Q96EY1 480 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 C14orf79Q96F83 325 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 ARHGDIGQ99819 225 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 PSD2Q9BQI7 771 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 ZNF559Q9BR84 538 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 TACO1Q9BSH4 297 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 BCO1Q9HAY6 547 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 C12orf10Q9HB07 376 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 TMEM27Q9HBJ8 222 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 KLHL9Q9P2J3 617 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 RPS6KB2Q9UBS0 482 aa11.29□□□□□ -0.6
CCDC90B-216ENST00000529856 MPDZO75970 2070 aa11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 DCHS2Q6V1P9 2916 aa11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 ELOVL7A1L3X0 281 aa11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 ELOA3DA6NLF2 546 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 M0R3H8 397 aa11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 EIF1BO60739 113 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 FMO6PO60774 539 aa11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 NPIPB7O75200 414 aa11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 DCTN3O75935 186 aa11.28□□□□□ -0.6
CCDC90B-216ENST00000529856 FAM107AO95990 144 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms