RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 KCNK9Q9NPC2 374 aa13.66□□□□□ -0.22
CLNS1A-210ENST00000528364 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
CLNS1A-210ENST00000528364 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
CLNS1A-210ENST00000528364 OSGIN1Q9UJX0 560 aa13.66□□□□□ -0.22
CLNS1A-210ENST00000528364 TMED7Q9Y3B3 224 aa13.66□□□□□ -0.22
CLNS1A-210ENST00000528364 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
CLNS1A-210ENST00000528364 FBN1P35555 2871 aaKnown RBP13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 GOLGA8QA0A0J9YX86 632 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 ZC3H12DA2A288 527 aaKnown RBP13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 GOLGA8OA6NCC3 632 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 E9PBE3 544 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 GOLGA8NF8WBI6 632 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 SDHDO14521 159 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 ITGA5P08648 1049 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 CD40P25942 277 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 TACR3P29371 465 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 SLC16A1P53985 500 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 CLNS1AP54105 237 aaKnown RBP13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 H3F3AP84243 136 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 DMTNQ08495 405 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 BST1Q10588 318 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 GABRA6Q16445 453 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 SLC22A25Q6T423 547 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 MREGQ8N565 214 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 PIGXQ8TBF5 258 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 PNPT1Q8TCS8 783 aaKnown RBP13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 MUS81Q96NY9 551 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 CACNG6Q9BXT2 260 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 MEAF6Q9HAF1 191 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 ASB6Q9NWX5 421 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 TMEM181Q9P2C4 612 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 HAO1Q9UJM8 370 aa13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 SPIN1Q9Y657 262 aaPredicted RBP13.65□□□□□ -0.22
CLNS1A-210ENST00000528364 IGHV4-30-2A0A087WSY4 118 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 AGAP5A6NIR3 686 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 M0R1B8 84 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 GPR171O14626 319 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 TTKP33981 857 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 MAGEA8P43361 318 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 HPCAP84074 193 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 MAPK11Q15759 364 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 AGAP6Q5VW22 663 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 C11orf71Q6IPW1 123 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 TRNT1Q96Q11 434 aaKnown RBP13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 OR52E6Q96RD3 313 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 PANX1Q96RD7 426 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 PARD6BQ9BYG5 372 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 GRIP2Q9C0E4 1043 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 WDR55Q9H6Y2 383 aaPredicted RBP13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 SSU72Q9NP77 194 aaKnown RBP13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 SLC7A10Q9NS82 523 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 SLC6A13Q9NSD5 602 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 AIG1Q9NVV5 245 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 RLIMQ9NVW2 624 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 TRAPPC4Q9Y296 219 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 FLVCR1Q9Y5Y0 555 aa13.64□□□□□ -0.23
CLNS1A-210ENST00000528364 PDLIM1O00151 329 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 TM9SF1O15321 606 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 CD5LO43866 347 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 TP53P04637 393 aaPredicted RBP13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 GKN3PP0CG01 181 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 POLR2HP52434 150 aaKnown RBP13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 SLC35A1P78382 337 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 SLC25A3Q00325 362 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 TNFAIP8L3Q5GJ75 292 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 CEP85LQ5SZL2 805 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 TSPO2Q5TGU0 170 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 OGFOD2Q6N063 350 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 TMEM108Q6UXF1 575 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 CASP12Q6UXS9 341 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 LRRC74BQ6ZQY2 392 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 CXXC5Q7LFL8 322 aaKnown RBP13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 ZIC4Q8N9L1 334 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 OIT3Q8WWZ8 545 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 DHRS9Q9BPW9 319 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 MTHFD2LQ9H903 347 aaPredicted RBP13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 FAIMQ9NVQ4 179 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 TAS2R16Q9NYV7 291 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 MALT1Q9UDY8 824 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 POU2F3Q9UKI9 436 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 GPR45Q9Y5Y3 372 aa13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 YLPM1P49750 1951 aaKnown RBP13.63□□□□□ -0.23
CLNS1A-210ENST00000528364 FAM234BA2RU67 622 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 DNPH1O43598 174 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 AKR7A3O95154 331 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 PGRP06401 933 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 NR2F1P10589 423 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 RPS4Y1P22090 263 aaKnown RBP13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 PTAFRP25105 342 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 FKBP2P26885 142 aaKnown RBP13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 EPHA3P29320 983 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 SLC1A3P43003 542 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 HTR3AP46098 478 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 FABP6P51161 128 aa13.62□□□□□ -0.23
CLNS1A-210ENST00000528364 WDR4P57081 412 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms